PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bobra.0162s0041.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
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Family | CPP | ||||||||
Protein Properties | Length: 252aa MW: 26477.9 Da PI: 6.821 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 22.5 | 2.3e-07 | 216 | 250 | 4 | 38 |
TCR 4 kgCnCkkskClkkYCeCfaagkkCseeCkCedCkN 38 +gC+C+k C ++ C C +g++C+ C+C +C N Bobra.0162s0041.3.p 216 RGCECRKNGCRNNNCWCRRSGRHCGWACNCLNCVN 250 79*******************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MVDSLTNWGD EDAVNEGLGP IAHPGAEAHN AHVDDDGLQV NPDQQDEPLL PVLPFPGQPG 60 PGPLPLPPNP VAPPAPPAPL AGAPIPAHQL QPLLLPQAVH HLQALHLEAL HLAHHLQALH 120 DQLALDHHLP QLQQQQPLPQ AHQVVQAAAP HQAGAANPAQ ARAAAPSPPL DLRQQAAAAE 180 QVPTAKRKGA SAIERTPSAQ PPAGVLAAAT PRLEPRGCEC RKNGCRNNNC WCRRSGRHCG 240 WACNCLNCVN R* |