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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bobra.0162s0041.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
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Family | CPP | ||||||||
Protein Properties | Length: 295aa MW: 31471.6 Da PI: 6.7484 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 22.2 | 2.9e-07 | 259 | 293 | 4 | 38 |
TCR 4 kgCnCkkskClkkYCeCfaagkkCseeCkCedCkN 38 +gC+C+k C ++ C C +g++C+ C+C +C N Bobra.0162s0041.1.p 259 RGCECRKNGCRNNNCWCRRSGRHCGWACNCLNCVN 293 79*******************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 295 aa Download sequence |
MVDSLTNWGD EDAVNEGLGP IAHPGAEAHN AHVDDDGLQV NPDQQDEPLL PVLPFPGQPG 60 PGPLPLPPNP VAPPAPPAPL AGAPIPAHQL QPLLLPQAVH HLQALHLEAL HLAHHLQALH 120 DQLALDHHLP QLQQQQPLPQ AQALFFDQAF PQLQQQQQPL PQTQALFLHQ TLPQLQQQQP 180 LPQAHQVVQA AAPHQAGAAN PAQARAAAPS PPLDLRQQAA AAEQVPTAKR KGASAIERTP 240 SAQPPAGVLA AATPRLEPRG CECRKNGCRN NNCWCRRSGR HCGWACNCLN CVNR* |