PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bobra.0141s0019.1.p

Organism

Botryococcus braunii

Taxonomic ID

38881

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus

Family

G2-like

Protein Properties

Length: 583aa MW: 61233.7 Da PI: 4.9417

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bobra.0141s0019.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	97.2	1.2e-30	160	214	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWtpeLH+rFv av++L G+ekAtPk il+lm ++gLt+ h+kSHLQkYRl Bobra.0141s0019.1.p 160 KQRLRWTPELHARFVAAVQHLHGPEKATPKGILKLMAIEGLTIFHIKSHLQKYRL 214 79****************************************************8 PP
2	Myb_DNA-binding	45.5	1.7e-14	162	213	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++ ++v av+ l g+ t+k I + m +g+t ++ks++qky+ Bobra.0141s0019.1.p 162 RLRWTPELHARFVAAVQHLHGPekaTPKGILKLMAiEGLTIFHIKSHLQKYR 213 89***************999***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 583 aa Download sequence
MDGDASPNGG FEPDGSFSPG GLGGGFPEDL NLEFWPTGVD QDFPMASMWA PHVDDGNLHS 60 APVPPQSMFA QQPHYGSEPA QHALPGVPRK SEDLLAGPLP SLASGDGTFN FLSLHSGEQP 120 AACSPHPELN PMYAGPLGGP PIFTASRSAS SSQGPRDMGK QRLRWTPELH ARFVAAVQHL 180 HGPEKATPKG ILKLMAIEGL TIFHIKSHLQ KYRLNIKLPG QGGPMFEGDE VRPADGARRS 240 SRRRKGKRTS ARARRKTRRG ASDSDSEEQE QYESEEEVEG GEGEGEGEEL EEAGEVDSGA 300 LAAKATPAPK AAPAITSSVV EEASVQASAG SSDLARRQQE LGQAMAKRMK LQQHLRSQLE 360 LQKALQEELE TTDNLVNRLM VEVGFPGAQL QASASAAIDF PSDKGGSKLP LMTSAPTSSQ 420 PLGGAPLQIS GERSSTAMTH LTLPASGASG AGGTASVQLT GTASVQEASN GAAYGEQLYG 480 GHRSDSTGML FGMGTEGGTE WQGSPSERML TSDDGGNACE DAGDLKFPRV SSLPPYCKEE 540 DFYLNLSGQM EVRGEEPHSQ AHMAGPGPAS DKALAAGHKA EY*

Sequence ? help Back to Top

Protein Sequence Length: 583 aa Download sequence

MDGDASPNGG FEPDGSFSPG GLGGGFPEDL NLEFWPTGVD QDFPMASMWA PHVDDGNLHS  60
APVPPQSMFA QQPHYGSEPA QHALPGVPRK SEDLLAGPLP SLASGDGTFN FLSLHSGEQP  120
AACSPHPELN PMYAGPLGGP PIFTASRSAS SSQGPRDMGK QRLRWTPELH ARFVAAVQHL  180
HGPEKATPKG ILKLMAIEGL TIFHIKSHLQ KYRLNIKLPG QGGPMFEGDE VRPADGARRS  240
SRRRKGKRTS ARARRKTRRG ASDSDSEEQE QYESEEEVEG GEGEGEGEEL EEAGEVDSGA  300
LAAKATPAPK AAPAITSSVV EEASVQASAG SSDLARRQQE LGQAMAKRMK LQQHLRSQLE  360
LQKALQEELE TTDNLVNRLM VEVGFPGAQL QASASAAIDF PSDKGGSKLP LMTSAPTSSQ  420
PLGGAPLQIS GERSSTAMTH LTLPASGASG AGGTASVQLT GTASVQEASN GAAYGEQLYG  480
GHRSDSTGML FGMGTEGGTE WQGSPSERML TSDDGGNACE DAGDLKFPRV SSLPPYCKEE  540
DFYLNLSGQM EVRGEEPHSQ AHMAGPGPAS DKALAAGHKA EY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13040.1	2e-23	G2-like family protein