PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0098s0026.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family C2H2
Protein Properties Length: 282aa    MW: 32029.2 Da    PI: 9.1911
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0098s0026.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.26.2e-0586109123
                          EEETTTTEEESSHHHHHHHHHH.T CS
              zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                          ++C+ Cgk+F++   L +H+ + H
  Bobra.0098s0026.1.p  86 WRCGQCGKVFRSEAFLDQHLVSqH 109
                          58*****************98877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MRRYSTATLL VAVLACGVRE ICCFYNVSLC DRSKSSLARA VIQKYIHPKV EELHYIYPSD  60
CQLNASRDVF HMHEESKVKL RGGATWRCGQ CGKVFRSEAF LDQHLVSQHP LPDSHAGDVC  120
LGDLVHLLHA QRFAEKTADV PGREGVHLQD AYSPHSFCPP SVAAHRREKC QAIGEACFPA  180
SEGKAATLLH DLFVGTLCRA HTCDRRTREA LLDQIIKTRK PSPWPFYVMF GFLLVVMCLL  240
YVLISLFYLQ HGGYSTPGDM KRLRRKKRNP WFTFRMKPKT Y*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63280.12e-26C2H2 family protein