PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0078s0044.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family C2H2
Protein Properties Length: 465aa    MW: 52651.9 Da    PI: 8.0473
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0078s0044.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.30.00012117137222
                          EETTTTEEESSHHHHHHHHHH CS
              zf-C2H2   2 kCpdCgksFsrksnLkrHirt 22 
                          +Cp+Cg  +s++ +L++H r 
  Bobra.0078s0044.1.p 117 QCPYCGLDCSSRTELNQHVRD 137
                          8*****************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 465 aa     Download sequence    
MPELAHSLIR PITHRLQQPT ALVVASRCRH SNRSLRKEFP ELLTVCQQHA VQSTERQQQA  60
KGSLKKLVKL RAEPQGWRCC ICMHCDFLTR TDLANHLIGK GHGSQWRAAQ ERGDAIQCPY  120
CGLDCSSRTE LNQHVRDVCT RLEDDFIPEG RRRTVSQAQL DADPRYAPLF AEKRSGGRLV  180
VRPLHEQHAY EAAVLLTEAF LVDSDPPRFP WMLAELDREA ADYAAEPSPI TEGRVDLSWG  240
SSYQAGGATP SPQHSPGSSH EEWCISDPAV PPSAVRLADT RLMIERAWGR WLWLVAEFVP  300
DDIEDAPRGQ DSRVIGTIAI LFHEREKALQ RLALLESPLP ASALDYSLWL SLSPPPDLPF  360
RRAAFLWWTG VHYRYRGQGV ARRLVRACES LAERVGFPDI YIQAATRQRD RANLLGDWMQ  420
TDYATALMTY VRAGYDTWRP KAHLLGWNKV DRSAVLMHRH LAEK*