PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62044763-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 344aa    MW: 38748.5 Da    PI: 8.7334
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62044763-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.26.7e-123378148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+ T+eE+ l +++ +++G++ Wk+Ia++++ gRt+k +  +w  y+
   AUR62044763-RA 33 KGSLTEEEQRLVIRLQAKHGNK-WKKIAAEVP-GRTAKRLGKWWEVYK 78
                     6788******************.*********.*******99998886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MATCLPANEH TLDRDAKSCL ERWKNYLKPG IKKGSLTEEE QRLVIRLQAK HGNKWKKIAA  60
EVPGRTAKRL GKWWEVYKEK QERTKKETSK CFEPIEEGKY DHILETFAEK LVKERTPPGP  120
TFLMATSNGG FLHSSDHPPP PVPPPPPVTS TTTMLPPWLS PSNGVRPPSS PSVTLSLSSS  180
IVPTPAPTAV AWLPQERVLH NIDNSPLTLG CLPSCPGALP EQMIMSELMD CCRELDEGHR  240
ALAAHKKEAA WRLNRVELQL ESEKASRKRE KMEEIEAKIN ALKDEQKASI ERIEAEYREQ  300
LAGLRRDAEA KEQKLAEHWA TKHMRITKLL EQMGCRTRVS EPS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37630.11e-121MYB family protein