PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62044486-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GeBP
Protein Properties Length: 327aa    MW: 36369.9 Da    PI: 9.4407
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62044486-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573104.48.9e-33132221197
          DUF573   1 klfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 
                     klfqr++se+Dei++L+G+idfkak+g++p+ +id+fy f+kks++++vsk q+v+K+rrLKkKf + +kk       +++++ + ++felskki
  AUR62044486-RA 132 KLFQRVFSEDDEILILKGMIDFKAKRGADPMIEIDDFYGFIKKSLHVEVSKVQIVDKVRRLKKKFFNAKKK-------KLTNPVEIQCFELSKKI 219
                     579*****************************************************************999.......9**************** PP

          DUF573  96 Wg 97 
                     W+
  AUR62044486-RA 220 WE 221
                     *8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MARNKAQKPL TEAPPEADSS EESTSNSSIE PEEERIPRPL SEDDSSSDDE EDEPTLQKIK  60
PISKPGFISG TLGKDQLKYT IAALPAGQVP EKRSSESALK SSSKKPRKEK SGSVAAISGG  120
AGGGVPEEGS KKLFQRVFSE DDEILILKGM IDFKAKRGAD PMIEIDDFYG FIKKSLHVEV  180
SKVQIVDKVR RLKKKFFNAK KKKLTNPVEI QCFELSKKIW ENNYSNAGMM LLLRMIRVLM  240
GLLLKTMSGK VVGTDEKDLE LEVGEAVAWE ELRKKGLRMM GAKARAEIGE MWEKVAMKQA  300
EARILRSEAE QEETRRIMEA LRSGKH*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1190203RRLKKKFFNAKKKK
2190204RRLKKKFFNAKKKKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.12e-18GeBP family protein