PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62044470-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Nin-like

Protein Properties

Length: 936aa MW: 103605 Da PI: 5.1747

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62044470-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.9	4.9e-29	592	643	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ AUR62044470-RA 592 AEKTVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 643 5899**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 936 aa Download sequence
MEYSFSPKEK GDSFWASTSP QSDIPMSVNG ETMNSTEDHQ FVNMSDMMSL DGYGGWCNSP 60 SSNEQLLASY VLSSLPFMPM NYAAYDQLSF AENANSAFPM NDSGCSTLNV FGSPLNNVDK 120 LVLPHKDAQL SPPVGSSEDN DSSSKQENIF MLSQNRIPRP LGLSLPERML RMLSLFKESS 180 GGGILAQVWV PIRSGDHYIL STCEQPYLLD QMLLGYREVS RSYTFSIEQK PGSFPGLPGR 240 VFISKLPEWT SNISYYSSAE YLRVKHALDH EVRGSVALPI FSPDESSCVA VLELVTVREK 300 SNFDIEMESV CHALEAVNLR TATPPRLLHQ HLSLNQRTAL AEITDVLRAV CHAHRLPLAL 360 TWIPCTFEEE DGEKKFSVYV QDNSLNLNEK SVLCIEETAC YVIDKEIQGF VTACVEHCLE 420 EGQGVAGKAL QSNLPFFFPD IKNYHISEYP LVQHARKFGL GAAVAIRLRS TYTGNADYIL 480 EFFLPLNIKG NKEQQLLLDS LAGTMQRICK SLRTVTDAEL VGSPDSKVEN REASPSFFPR 540 DLPQLFAQSG SIGTEQMSFD SPSIINDQIK EDGHSEKASG SRRPMEKKRS TAEKTVSLSV 600 LQQYFSGSLK DAAKSIGVCP TTLKRICRQH GISRWPSRKI NKVNRSLRKI QTVLDSVEGV 660 EGGLKFDPTT GELVAAGSVI QELDARNNLF LPCKILPVRK CETGKQDELC FPSTCLVGEI 720 PAVKLENDSC VIGQQKKSIT SSDCIEEVRK SDLDIGSLHL RDHSQYRHFV SQNPGCTVAP 780 DEMESDDGVT EHNQATSSGM TDSSKASGST SSSPNSNHKQ RQSEDKMSHE DGGSRIAIKA 840 TYKDDTVRFK FEPCTGCLHL YEEVAIRFKI QVGTFQLKYL DDEEEWVMLV SDSDLQECLE 900 IMEYLGKNSI KFLVRDLSCS IGSSGGSSCF IPGIC*

Sequence ? help Back to Top

Protein Sequence Length: 936 aa Download sequence

MEYSFSPKEK GDSFWASTSP QSDIPMSVNG ETMNSTEDHQ FVNMSDMMSL DGYGGWCNSP  60
SSNEQLLASY VLSSLPFMPM NYAAYDQLSF AENANSAFPM NDSGCSTLNV FGSPLNNVDK  120
LVLPHKDAQL SPPVGSSEDN DSSSKQENIF MLSQNRIPRP LGLSLPERML RMLSLFKESS  180
GGGILAQVWV PIRSGDHYIL STCEQPYLLD QMLLGYREVS RSYTFSIEQK PGSFPGLPGR  240
VFISKLPEWT SNISYYSSAE YLRVKHALDH EVRGSVALPI FSPDESSCVA VLELVTVREK  300
SNFDIEMESV CHALEAVNLR TATPPRLLHQ HLSLNQRTAL AEITDVLRAV CHAHRLPLAL  360
TWIPCTFEEE DGEKKFSVYV QDNSLNLNEK SVLCIEETAC YVIDKEIQGF VTACVEHCLE  420
EGQGVAGKAL QSNLPFFFPD IKNYHISEYP LVQHARKFGL GAAVAIRLRS TYTGNADYIL  480
EFFLPLNIKG NKEQQLLLDS LAGTMQRICK SLRTVTDAEL VGSPDSKVEN REASPSFFPR  540
DLPQLFAQSG SIGTEQMSFD SPSIINDQIK EDGHSEKASG SRRPMEKKRS TAEKTVSLSV  600
LQQYFSGSLK DAAKSIGVCP TTLKRICRQH GISRWPSRKI NKVNRSLRKI QTVLDSVEGV  660
EGGLKFDPTT GELVAAGSVI QELDARNNLF LPCKILPVRK CETGKQDELC FPSTCLVGEI  720
PAVKLENDSC VIGQQKKSIT SSDCIEEVRK SDLDIGSLHL RDHSQYRHFV SQNPGCTVAP  780
DEMESDDGVT EHNQATSSGM TDSSKASGST SSSPNSNHKQ RQSEDKMSHE DGGSRIAIKA  840
TYKDDTVRFK FEPCTGCLHL YEEVAIRFKI QVGTFQLKYL DDEEEWVMLV SDSDLQECLE  900
IMEYLGKNSI KFLVRDLSCS IGSSGGSSCF IPGIC*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43500.1	0.0	Nin-like family protein