PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62044212-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family LFY
Protein Properties Length: 362aa    MW: 40026.9 Da    PI: 9.0544
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62044212-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY1971.3e-6012331198
         FLO_LFY   1 mdpeafsaslfkwd.praaaaapparlleeaavseapleaaaaaaarklr...............................eleelfkayGvryl 63 
                     md++ f+aslfkwd pr++ aa++a  ++++++++a++++     ar l                                +leelf+ayG+ry+
  AUR62044212-RA   1 MDQDPFTASLFKWDyPRSTLAAASAAGAPQQSTAQAATSTLPPYFARGLIgmreppgfamgipgsvaaaanagagassgsgGLEELFQAYGIRYY 95 
                     9*************9887775554333333333333323333333332112336666777777778888888888899999************** PP

         FLO_LFY  64 tvakiaelGftvstLvdmkdeelddlmkslseifrldllvGeryGikaavraerrrleeeeaekkrrk.ll.......sedeetaldalsqegls 150
                     t+akiae+Gftv+tLvdmk+ee+d++m+sls++fr+dllvGeryGikaa+raerrrle+ e+++++r+ ++        + +++ ldalsqegls
  AUR62044212-RA  96 TAAKIAEMGFTVNTLVDMKEEEVDEMMNSLSHLFRWDLLVGERYGIKAAIRAERRRLEDLEESRRHRHnHMslsntppPDSSHHPLDALSQEGLS 190
                     ***********************************************************88888877742245666644445569********** PP

         FLO_LFY 151 eepvqeekeaagsggeglgeaelvaaeekkseeekkkaskkkqkrkkk 198
                     ee v +eke +gsgg++   +e+v+a+ +++++++++++kk ++++++
  AUR62044212-RA 191 EEGV-HEKEVVGSGGGN---WEMVGAPPTHTNHQDRQQRKK-HRKQQH 233
                     *988.568999998887...999988875555555555333.332222 PP
2FLO_LFY245.32.9e-75239344280385
         FLO_LFY 280 kvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkL 374
                      vtnqvfr+akkaga+yinkPkmrhYvhCYalhcLdee+snalrrafkergenvGawrqacykplvaiaarqgwdida+fn+hprLsiWYvPtkL
  AUR62044212-RA 239 TVTNQVFRFAKKAGATYINKPKMRHYVHCYALHCLDEETSNALRRAFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNSHPRLSIWYVPTKL 333
                     69********************************************************************************************* PP

         FLO_LFY 375 rqLChlerska 385
                     rqLCh+ers++
  AUR62044212-RA 334 RQLCHTERSSS 344
                     ********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
MDQDPFTASL FKWDYPRSTL AAASAAGAPQ QSTAQAATST LPPYFARGLI GMREPPGFAM  60
GIPGSVAAAA NAGAGASSGS GGLEELFQAY GIRYYTAAKI AEMGFTVNTL VDMKEEEVDE  120
MMNSLSHLFR WDLLVGERYG IKAAIRAERR RLEDLEESRR HRHNHMSLSN TPPPDSSHHP  180
LDALSQEGLS EEGVHEKEVV GSGGGNWEMV GAPPTHTNHQ DRQQRKKHRK QQHLQARNTV  240
TNQVFRFAKK AGATYINKPK MRHYVHCYAL HCLDEETSNA LRRAFKERGE NVGAWRQACY  300
KPLVAIAARQ GWDIDAIFNS HPRLSIWYVP TKLRQLCHTE RSSSNTSNSI SAGAGPHHLP  360
F*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.13e-64LFY family protein