PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62044004-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 368aa    MW: 41594.2 Da    PI: 7.5649
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62044004-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.53.8e-19186236256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+ge
  AUR62044004-RA 186 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAALAYDREAFKLRGE 236
                     59******9.**********955...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    
MSSRKAKEMI EGTENMGKTV WDRDKGKGNN QQQQWSPVFG EASSAAAGRP SKKIRSPERQ  60
FIPSSQSQLF NPYPFTNTSS KIAFPFTFDG SSNQMNQPQF SDLNTQTIPL QQQQQMISFN  120
QGCGYQYPYQ HTSLNQQMQQ LQYWSEALNL SPRGRLMMMN RFANQGFGRQ MPQGGTPVPP  180
ISTTKLYRGV RQRHWGKWVA EIRLPRNRTR LWLGTFDTAE DAALAYDREA FKLRGENARL  240
NFPELFLNKE VEPEVSSGAA SSSDVTVMSD PAQTAGEGSS ETSEWPWKEM TDAWLNAIPA  300
GWGPGSPVWD NFSDNNLFLQ QNNLFASNLS HPVYHQVQQN QQEEVFGPSP SYSPSCPMRP  360
FFSKDQD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.19e-60ERF family protein