PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62043441-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

TCP

Protein Properties

Length: 332aa MW: 35857.6 Da PI: 9.0643

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62043441-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	111.5	1.2e-34	22	132	1	89
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.............................. 65 a+g+kdrhsk+ T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak++i++l ++ AUR62043441-RA 22 ATGRKDRHSKVFTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKASIDKLDELppwdptagpsngvdvnvgstdftvgdnsgs 116 589**************************************************************999986666666655555555555443222 PP TCP 66 .ssssaseceaesssssasnsssg............k 89 s + AUR62043441-RA 117 sS---------------------FyapqcvdtqslgD 132 20.....................02222222222221 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MGLKSTTGGE IVQVQGGHII RATGRKDRHS KVFTAKGPRD RRVRLSAHTA IQFYDVQDRL 60 GYDRPSKAVD WLIKKAKASI DKLDELPPWD PTAGPSNGVD VNVGSTDFTV GDNSGSSSFY 120 APQCVDTQSL GDSMKSFFPT NNTSGENSIS FQNYQHEFIA RGGSQNNEDL CLSLHTLQDP 180 EGVRNGQHQQ THSNHSSGLF QGSGSSMGFD VGAGGWPESQ QQQQDLGRFA RMFGWTSGGS 240 AGGEGRGGML FNPSPLQQGL LLGQQGPMTT STYSQRGPLQ SSFSPLMTTS NANGARAIPN 300 TAQVPWHRKR ISISDATIMQ NIGHFYQIRF S*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	2e-64	TCP family protein