PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62043163-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 550aa MW: 60811.6 Da PI: 4.9775

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62043163-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.5	0.00013	399	418	36	55
S-STCHHHHHHHHHHHHHHH CS HLH 36 kKlsKaeiLekAveYIksLq 55 +K++Ka+iL ++eY+k+L+ AUR62043163-RA 399 TKMDKASILGDTIEYVKQLR 418 89****************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence
MSVPESSNNK QLQHMLQSAV QAVQWTYSLF WQYCPQQGIL VWLDGYYNGA IKTRKMVQPM 60 DDSRTAEEAC LQRSQQLKEL YESLSAGESN QPERRPCAAL SPEDLTESEW FYLMCVSFSF 120 PPGVGLPGKA YAKGQHMWLT GANEVDSKVF SRAILAKTVV CIPVMDGVVE LGYTERPALS 180 EHSTSNPTAS SNHSHFQSPL ALATYTTVDP LSIPSDGSGA NNNDDNDETE GEADSDPEAQ 240 AILGLPVKLE LRYQKGITVV PDSSDEPSEL MQIEIPEDIQ LSSPDVVSNN LDSNFPLVAV 300 GPTPTPPTPS HEHHLVDSFI TTKSTRRWPV MQQQQLEDPI IISNNFQTPS LVPLLHSKYR 360 EENFSFLKSN LHYMALGRGK STSGPPHDEL SASHVPFVTK MDKASILGDT IEYVKQLRKK 420 VQELEGRTKS GEEKDKRKLQ VIEESSSGSE MRGKKTAAQS QQSNMLEVSI IESDALVELQ 480 CPYKEGLLLD VMIKLRDMRL EVTTVLSSLN NGLLAAELRA KVKENANGKK PSIIEVKRAV 540 NQKIPQSDP*

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence

MSVPESSNNK QLQHMLQSAV QAVQWTYSLF WQYCPQQGIL VWLDGYYNGA IKTRKMVQPM  60
DDSRTAEEAC LQRSQQLKEL YESLSAGESN QPERRPCAAL SPEDLTESEW FYLMCVSFSF  120
PPGVGLPGKA YAKGQHMWLT GANEVDSKVF SRAILAKTVV CIPVMDGVVE LGYTERPALS  180
EHSTSNPTAS SNHSHFQSPL ALATYTTVDP LSIPSDGSGA NNNDDNDETE GEADSDPEAQ  240
AILGLPVKLE LRYQKGITVV PDSSDEPSEL MQIEIPEDIQ LSSPDVVSNN LDSNFPLVAV  300
GPTPTPPTPS HEHHLVDSFI TTKSTRRWPV MQQQQLEDPI IISNNFQTPS LVPLLHSKYR  360
EENFSFLKSN LHYMALGRGK STSGPPHDEL SASHVPFVTK MDKASILGDT IEYVKQLRKK  420
VQELEGRTKS GEEKDKRKLQ VIEESSSGSE MRGKKTAAQS QQSNMLEVSI IESDALVELQ  480
CPYKEGLLLD VMIKLRDMRL EVTTVLSSLN NGLLAAELRA KVKENANGKK PSIIEVKRAV  540
NQKIPQSDP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	2e-82	bHLH family protein