PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62043106-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRF
Protein Properties Length: 271aa    MW: 29216.3 Da    PI: 7.3001
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62043106-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC45.81.1e-1498123126
             WRC   1 daepgrCrRtDGKkWRCsrrvlegkk 26 
                     d+epgrCrRtDGKkWRCsr+v++g+k
  AUR62043106-RA  98 DPEPGRCRRTDGKKWRCSRDVVAGHK 123
                     79**********************98 PP
2QLQ49.21.6e-172560237
             QLQ  2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37
                    +F+ aQ+q+L+ Q+l+y++++a++ vP+eLlq ++k
  AUR62043106-RA 25 SFSLAQWQELELQALIYRHMVAGASVPAELLQLVKK 60
                    8*******************************9975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MTNYYILDFD HFIVVVKIGS GGRYSFSLAQ WQELELQALI YRHMVAGASV PAELLQLVKK  60
SLFTSSNAPY YLHHYSPHFQ PAAALVLQAG YWGKGAMDPE PGRCRRTDGK KWRCSRDVVA  120
GHKSSDNKAL FGPQHESSSA SGDGGKSNAN SSKVLMQFFD DWPRSDNGEG NNLSSSTGLS  180
ISTPGNPTSD FLRLSTGNGD EQGLRDSYGN DERERAHQLN WSAGGWGANP VASMGGPLAE  240
ALRSSSNSSP TSVLHQLPRC SAPDTNFVSA *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52910.12e-33GRF family protein