PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62042947-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 771aa MW: 87650.8 Da PI: 6.5069

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62042947-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	47.5	5.7e-15	59	152	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+++Ak++GFs+r+++++ + +ge + t+ ++++ +++ k +r+r+++r+gC+a +++ k++ +w+vt ++++HnHel AUR62042947-RA 59 EFYCSFAKQCGFSIRRHRTRGKdGWDGESHEGTLPAIVVDIHRRKPSEEGKLQRNRKSSRCGCQAYMRIVKRSdldVPEWRVTGFSNNHNHELL 152 6*************999877567888999999888888888888777899************99998676789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 771 aa Download sequence
MTVNGSQNME SSENETDLSQ DNIESAEGIS EDAILSRQTS VNLVPFIGQR FVSQDAAYEF 60 YCSFAKQCGF SIRRHRTRGK DGWDGESHEG TLPAIVVDIH RRKPSEEGKL QRNRKSSRCG 120 CQAYMRIVKR SDLDVPEWRV TGFSNNHNHE LLKSVEAQIP PSHCTISADD KSRICMFAKA 180 GMSARQMLRL MELEKGVKLG CLPFTELHIR DLLQSFRHVD KDNDAIDLIS MCKRLKDENS 240 YFKYDFKLDG HNRLEHIAWS YPSSIQKYEA FGDAILLDTN HRLDAYDMLL GLLIGVDNHG 300 KACLYSCVLL RDENLESFTW ALKTFLCFMK GKAPQTILTD QNMWLKEAIT CEMPETKHAF 360 SIWHIIANLS DWFSLPLGSH YDGWKTEFYR LYSLEMVDEF EAEWKEMVDR YELQSNKHII 420 CLYALRDFWA LSFLRRYFFA GLMSRSVTDS INALIQRILS VQSTLDCFID KVADIAEYDD 480 HGGSKLKMQQ NEKVSLKTGS PMESHAATVF TPFAFLSSKK SSFQPLNMPP LWLAKFEFLG 540 ILCRHILRVL STNNCFRIPD PYLPLRWRLV SNEHVEKEQT EKVKFLEAIA STIVSESVVT 600 EERLTFACEH MSMVLAHIKQ LPKLNNHNEA NEMGINSSTG SLIIPGVEAS DSIAQSFALG 660 NPHESFLVKL KETNPNPGLD NNMSGKRRRA IPCEQYAHAA CDSAIIEGNS VHADGDAFCG 720 FFYTRVEYIP YPSGVQFSGS SFVSQLRMLL VTDRGLIYSV AKYDRSTADV *

Sequence ? help Back to Top

Protein Sequence Length: 771 aa Download sequence

MTVNGSQNME SSENETDLSQ DNIESAEGIS EDAILSRQTS VNLVPFIGQR FVSQDAAYEF  60
YCSFAKQCGF SIRRHRTRGK DGWDGESHEG TLPAIVVDIH RRKPSEEGKL QRNRKSSRCG  120
CQAYMRIVKR SDLDVPEWRV TGFSNNHNHE LLKSVEAQIP PSHCTISADD KSRICMFAKA  180
GMSARQMLRL MELEKGVKLG CLPFTELHIR DLLQSFRHVD KDNDAIDLIS MCKRLKDENS  240
YFKYDFKLDG HNRLEHIAWS YPSSIQKYEA FGDAILLDTN HRLDAYDMLL GLLIGVDNHG  300
KACLYSCVLL RDENLESFTW ALKTFLCFMK GKAPQTILTD QNMWLKEAIT CEMPETKHAF  360
SIWHIIANLS DWFSLPLGSH YDGWKTEFYR LYSLEMVDEF EAEWKEMVDR YELQSNKHII  420
CLYALRDFWA LSFLRRYFFA GLMSRSVTDS INALIQRILS VQSTLDCFID KVADIAEYDD  480
HGGSKLKMQQ NEKVSLKTGS PMESHAATVF TPFAFLSSKK SSFQPLNMPP LWLAKFEFLG  540
ILCRHILRVL STNNCFRIPD PYLPLRWRLV SNEHVEKEQT EKVKFLEAIA STIVSESVVT  600
EERLTFACEH MSMVLAHIKQ LPKLNNHNEA NEMGINSSTG SLIIPGVEAS DSIAQSFALG  660
NPHESFLVKL KETNPNPGLD NNMSGKRRRA IPCEQYAHAA CDSAIIEGNS VHADGDAFCG  720
FFYTRVEYIP YPSGVQFSGS SFVSQLRMLL VTDRGLIYSV AKYDRSTADV *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein