PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62042871-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 312aa    MW: 34941.2 Da    PI: 6.9528
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62042871-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.50.0001483109430
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC CS
             HLH   4 ahnerErrRRdriNsafeeLrellPka 30 
                     +h+ +Er R ++i +++  L++l+P +
  AUR62042871-RA  83 SHSLAERARKEKISERMRILQDLVPGC 109
                     8************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MVSTEEIGLE RPAAPGLLRF RFLMSDSDGK RLKSTGFGDE IQNQRANNET TSGKGGEQKS  60
KPVSDPSKDY IHVRARRGQA TDSHSLAERA RKEKISERMR ILQDLVPGCN KRFMINTLIP  120
DQIPGFQVIG KALFLSMKLE DVNTRTSPGI EGFPSKDEAS VVTEYILKIL GLDICADTMN  180
LVIDKSIQTA YIEAIRSAQH FIYIENQYFL GSSYAWPNYK NAASVLTDNV LAGADHLIPM  240
ELALKIVSKI RAKERFSVYV VIPMWPEGVP TSASVQEILF WQGETMQMMY SIIAQEIKVM  300
NLEDAYSIYM K*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.21e-36bHLH family protein