PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62042857-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 191aa    MW: 21030 Da    PI: 6.3541
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62042857-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.81.4e-182372255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +gr++AeIrdps+   + r++lg+f+taeeAa a+++a ++++g
  AUR62042857-RA 23 KFLGVRRRP-WGRYAAEIRDPST---KERHWLGTFDTAEEAALAYDRASRSMRG 72
                    577******.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MFKSKSSKTT PQQQQEGANP PIKFLGVRRR PWGRYAAEIR DPSTKERHWL GTFDTAEEAA  60
LAYDRASRSM RGPRGRTNFV YSDMPPGSSV TSIMSPDEQH QNSDQKVQDH SHQPEFSLSA  120
GNDYAYTAVS NAQFTGELGQ GSWADPTVGA DYMGFDSTNA GYVHSPLFSS MPPVDRGLDP  180
FNLGSSSYFF *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.17e-49ERF family protein