PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62042792-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 368aa MW: 41808.6 Da PI: 5.59

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62042792-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	53.3	9.3e-17	62	150	2	88
FAR1 2 fYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 Yn+YA + GF +rk++ +++ +++++ +r +vCs g+++e+k+ ++++ ++ + rtgCka+++ +k +g ++v + HnH+ AUR62042792-RA 62 LYNSYAFKHGFGIRKDRLNRRdDKDRTPRQRFLVCSFAGFKQEKKHGEQSKVYQKRNFRTGCKAHIQFDIDKvSGLYVVVNHTMVHNHS 150 7*************99888456666677778**********999999**************99*************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MVYQSEFRHD SNARFVDDAN DYDINDEGEV EGIVNLNEGF TEATESELFD RKVKSDEEAY 60 DLYNSYAFKH GFGIRKDRLN RRDDKDRTPR QRFLVCSFAG FKQEKKHGEQ SKVYQKRNFR 120 TGCKAHIQFD IDKVSGLYVV VNHTMVHNHS RVAVSKRHLI RSHRKVTNEQ VVMMSSLTES 180 SIPIADAVRV LKHQAGGEAN LSFLCRDAYG ALSQHKKMMF DGCDAKRLLS YFKERKSNRA 240 QNDLSARAVI EEAIEECTAR INLLMGEDKD VPPELSKTNE QDVTPEKGDG SLLEPAVIFE 300 ELAEEHGGLE KEHGGFEREH GGIVKEHTVQ DFLPVPDGNV LAHSNEFGGS LEFFEPDDYF 360 GVNIREL*

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MVYQSEFRHD SNARFVDDAN DYDINDEGEV EGIVNLNEGF TEATESELFD RKVKSDEEAY  60
DLYNSYAFKH GFGIRKDRLN RRDDKDRTPR QRFLVCSFAG FKQEKKHGEQ SKVYQKRNFR  120
TGCKAHIQFD IDKVSGLYVV VNHTMVHNHS RVAVSKRHLI RSHRKVTNEQ VVMMSSLTES  180
SIPIADAVRV LKHQAGGEAN LSFLCRDAYG ALSQHKKMMF DGCDAKRLLS YFKERKSNRA  240
QNDLSARAVI EEAIEECTAR INLLMGEDKD VPPELSKTNE QDVTPEKGDG SLLEPAVIFE  300
ELAEEHGGLE KEHGGFEREH GGIVKEHTVQ DFLPVPDGNV LAHSNEFGGS LEFFEPDDYF  360
GVNIREL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-09	FAR1 family protein