PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62042573-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 762aa MW: 87574 Da PI: 8.5291

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62042573-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	21.5	7.5e-07	113	193	7	90
FAR1 7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 A+++GF ++++kskk+k+ + C g+ ++++++ ++ ++++ + ++C ++ ++++ w+v+ l HnH+l+ AUR62042573-RA 113 AYSLGFVTVIQKSKKKKNR----WVIIGCDHGGSYRTNRSRiPNSGKKKSGTRLMNCPFQICGRMNQGTSWRVEIKYLSHNHNLS 193 99********9998554....45668999998777776646677777778889**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 762 aa Download sequence
MGYLQLKALA ADLRTPQLDN CTPLWPHYKK MDGEFDFEGI NDNEFWELFG LDDLPNVLEE 60 NGHEDCNSSH SHINGSPEFD NHQPPQMPTD MYQLSSQKFS NREILLETVR GMAYSLGFVT 120 VIQKSKKKKN RWVIIGCDHG GSYRTNRSRI PNSGKKKSGT RLMNCPFQIC GRMNQGTSWR 180 VEIKYLSHNH NLSSDISGHP YTRRFSREEV NEIKEMIAAD IAPRQILTKL RKGNSNLKAI 240 SRTLYNVKAK IIKDGLGGRS MIQALMDELG KGGFTYDVEC DNEGHVTHLL FSHPSSIELA 300 RIYSYTFVMD CTYKINKYKM PLLDIVGVTS FNTSFFCGFA FLFKEEESDY VWALQKFGKI 360 LGYDKQPSVI VTDRELALMN AIKVVFPNTC NLLCVWHIEK NILAKCKPFF DDGDEWDVFM 420 SDWTNLIDSS TEDQFNEAWS EIEVKYGKYR DILIYIHNTW FPWKKYFFRA WSSEYMHFGH 480 VSSRAEGSHA TLKKYLEVSS GDLRTVKEKI CHAVDHQYNE IKTQLSSEKI RIPHDLRIPF 540 LSKLIGHVSH FALRKLLNQF ELAYSDSLSP TCIGQFSKTM GLPCAHVMRR MTNEDLKLDT 600 IHYQWRMDNI SLSKNGENQD VHGDRIDVLV QELQLKYQQL PLTQKEGIRK QISQFVSPSS 660 PLVLEPMIRQ SKTLGTNSRK KKKQSSSTKK DPSGFEMVEK VRRCNMCGNM NHDRRRCPKN 720 TTQNSSMSFM PPILNGLPSP STSFVVDLNL LPPNSDYNNP S*

Sequence ? help Back to Top

Protein Sequence Length: 762 aa Download sequence

MGYLQLKALA ADLRTPQLDN CTPLWPHYKK MDGEFDFEGI NDNEFWELFG LDDLPNVLEE  60
NGHEDCNSSH SHINGSPEFD NHQPPQMPTD MYQLSSQKFS NREILLETVR GMAYSLGFVT  120
VIQKSKKKKN RWVIIGCDHG GSYRTNRSRI PNSGKKKSGT RLMNCPFQIC GRMNQGTSWR  180
VEIKYLSHNH NLSSDISGHP YTRRFSREEV NEIKEMIAAD IAPRQILTKL RKGNSNLKAI  240
SRTLYNVKAK IIKDGLGGRS MIQALMDELG KGGFTYDVEC DNEGHVTHLL FSHPSSIELA  300
RIYSYTFVMD CTYKINKYKM PLLDIVGVTS FNTSFFCGFA FLFKEEESDY VWALQKFGKI  360
LGYDKQPSVI VTDRELALMN AIKVVFPNTC NLLCVWHIEK NILAKCKPFF DDGDEWDVFM  420
SDWTNLIDSS TEDQFNEAWS EIEVKYGKYR DILIYIHNTW FPWKKYFFRA WSSEYMHFGH  480
VSSRAEGSHA TLKKYLEVSS GDLRTVKEKI CHAVDHQYNE IKTQLSSEKI RIPHDLRIPF  540
LSKLIGHVSH FALRKLLNQF ELAYSDSLSP TCIGQFSKTM GLPCAHVMRR MTNEDLKLDT  600
IHYQWRMDNI SLSKNGENQD VHGDRIDVLV QELQLKYQQL PLTQKEGIRK QISQFVSPSS  660
PLVLEPMIRQ SKTLGTNSRK KKKQSSSTKK DPSGFEMVEK VRRCNMCGNM NHDRRRCPKN  720
TTQNSSMSFM PPILNGLPSP STSFVVDLNL LPPNSDYNNP S*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	2e-17	FAR1 family protein