PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62042135-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 200aa    MW: 22809.5 Da    PI: 9.859
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62042135-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR143.11.4e-1312109290
            FAR1   2 fYneYAkevGFsvrkskskks..krngei.tkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 
                     ++n+Y k+ GF v++ +s ++  k+  +i  + t++C   gk+++++k       +e e ++ a++++gC a++  + +++gkwe+ k+ l H+H
  AUR62042135-RA  12 YFNAYEKQQGFGVVRGQSAYKhfKDGSKIkREVTWKCDYAGKPDTRRKVggkrisRELEGEPVATKKCGCGAMVYSSFTSNGKWELRKVCLSHSH 106
                     89************999877755444444145689**********999988888777788899******************************** PP

            FAR1  88 ela 90 
                      ++
  AUR62042135-RA 107 LFS 109
                     886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MIFDSWQEID VYFNAYEKQQ GFGVVRGQSA YKHFKDGSKI KREVTWKCDY AGKPDTRRKV  60
GGKRISRELE GEPVATKKCG CGAMVYSSFT SNGKWELRKV CLSHSHLFSP SKSMLVTKYR  120
LEELKKVPYL GVHSTLVMML GFLTQNSIGG WLVSGMDMKM NTRLCDFAEK QSAAMEQRFL  180
LERLADVAYM RYLQPISNI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.22e-06FAR1 family protein