PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62042086-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB

Protein Properties

Length: 245aa MW: 27509.3 Da PI: 6.5215

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62042086-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	36.2	1.4e-11	6	52	2	45
SSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwq 45 g+W+ Ed+l+ +a +G +W +Ia +++ gR++ ++++++ AUR62042086-RA 6 GKWSRAEDKLFEEALVIFGDLateeRWQKIADHVP-GRSATEVRDHYE 52 79***************77**********.********96 PP
2	Myb_DNA-binding	45.8	1.4e-14	119	163	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + +++G+g+W++I+r + +Rt+ q+ s+ qky AUR62042086-RA 119 PWTEEEHRLFLIGLEKYGKGDWRSISRNVVVTRTPTQVASHAQKY 163 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MRGDLGKWSR AEDKLFEEAL VIFGDLATEE RWQKIADHVP GRSATEVRDH YEALLHDVEQ 60 IDSGLVELPS YSDELAASWF GTESPSNRLN QISFGSSDGN NSNANKPKQN DVERKKGTPW 120 TEEEHRLFLI GLEKYGKGDW RSISRNVVVT RTPTQVASHA QKYYLRQNSG KKERKRSSIH 180 DITTVDEKSA ARPAVEQSWI PQPGGNAMDH HTAYQQMGAS PPFNAANTTQ EGSPFGYQTF 240 RFPM*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	6e-71	MYB family protein