PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62041808-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

HSF

Protein Properties

Length: 413aa MW: 47486.8 Da PI: 5.0795

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62041808-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111	8.4e-35	16	107	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+ye+++d+++++++sws++++sf+vl++ ef++ +Lp++Fkh+nf+SF+RQLn+YgF+kv+ e+ weF+++ F +g+ +ll++ AUR62041808-RA 16 FLTKTYEMVDDPTTDSIVSWSSTNKSFIVLNPPEFSRVLLPRFFKHNNFSSFIRQLNTYGFRKVDPEQ---------WEFANDDFIRGQSHLLKN 101 9*************************************************************9998.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k AUR62041808-RA 102 IHRRKP 107 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MMMDEIQGGS NALPPFLTKT YEMVDDPTTD SIVSWSSTNK SFIVLNPPEF SRVLLPRFFK 60 HNNFSSFIRQ LNTYGFRKVD PEQWEFANDD FIRGQSHLLK NIHRRKPVHS HSLTNLHGQV 120 NSNPLTDSER QKYKDDIERL KHEREYLLAE SQRQRQEEQV LESQVQLVKE RMEYMEKRQH 180 KFVSYFAQIL KKPELVFAVP QVENHDRKRR VSSRPDYLHD ETSNEDSVGT LRVSRRGSPD 240 ETYGLDLDTD LLERMESSLT FWENVAEDIE ELCALRNSSI ELTESTTCVE SPAISYTQLN 300 LDLPSTSSRI DMNSEPPVTA SMVAPDPPQP RKEQEAGNAP AAPQGVNDMF WEQFLTENPG 360 SSDVQEVQSE RKESGLKEKD SRLIDHGRYW LGIRNSNNLP EHIGQLTSAG RS*

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MMMDEIQGGS NALPPFLTKT YEMVDDPTTD SIVSWSSTNK SFIVLNPPEF SRVLLPRFFK  60
HNNFSSFIRQ LNTYGFRKVD PEQWEFANDD FIRGQSHLLK NIHRRKPVHS HSLTNLHGQV  120
NSNPLTDSER QKYKDDIERL KHEREYLLAE SQRQRQEEQV LESQVQLVKE RMEYMEKRQH  180
KFVSYFAQIL KKPELVFAVP QVENHDRKRR VSSRPDYLHD ETSNEDSVGT LRVSRRGSPD  240
ETYGLDLDTD LLERMESSLT FWENVAEDIE ELCALRNSSI ELTESTTCVE SPAISYTQLN  300
LDLPSTSSRI DMNSEPPVTA SMVAPDPPQP RKEQEAGNAP AAPQGVNDMF WEQFLTENPG  360
SSDVQEVQSE RKESGLKEKD SRLIDHGRYW LGIRNSNNLP EHIGQLTSAG RS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45710.1	1e-110	HSF family protein