PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62041696-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family Trihelix
Protein Properties Length: 289aa    MW: 33009.8 Da    PI: 6.3895
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62041696-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix33.79.5e-11551014086
        trihelix  40 ergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +  ++r+p qCk++w+nl ++++k+k++e+k  +++ s + + ++l+
  AUR62041696-RA  55 KISVKRGPAQCKKRWSNLIGDFRKVKNWESKMVNKADSFWNMRNDLR 101
                     56799***************************988888999988885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MAIVSELNGN QNPGLDDGSV TDAKSKRHPR WTRQETLTLI QAKEITENSP HKGRKISVKR  60
GPAQCKKRWS NLIGDFRKVK NWESKMVNKA DSFWNMRNDL RKEKKLPVTF DVEVFKEGGD  120
DDEVDEEDEK MQDGAEVLSE IKNKVQETLA ITGKLDDVKS ADNVTEEPVK NFCIQEPISE  180
EQHHQAFQKK NKSSNQDTSK ESRPNFSNED SQGKGKRQRL STDECKANCS EEQLLKVLEE  240
NNRLLNAQLE SHNKNCQLER EQRKQNNNEL MSTLSNLTDV LSKIAEKL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1214219KGKRQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.14e-44Trihelix family protein