PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62040941-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C2H2
Protein Properties Length: 176aa    MW: 19404 Da    PI: 9.0817
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62040941-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.50.000924365123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C++ F++   L  H  +H
  AUR62040941-RA 43 YECKTCNRQFPSFQALGGHRASH 65
                    99**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MGIKRSREEI ELERTIAMAN YLILLSQPPN TVSLEPSTGG RIYECKTCNR QFPSFQALGG  60
HRASHKKPRL LNIEGEQHQS DVRKAKIHEC SICGLEFPIG QALGGHMRRH RAALARSQHQ  120
PTFRGSPTLS LSLDGSSSHG VSELSGVSKS RSSIEDHDHR RVICFDLNLT PLENG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.18e-32C2H2 family protein