PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62040662-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 552aa MW: 59730.7 Da PI: 6.9217

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62040662-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.6	4.7e-32	188	245	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK vkgsefprsYY+Ct+++C+vkk ers d++++ei+Y+g+H+h+k AUR62040662-RA 188 DDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSP-DGTITEIIYKGQHDHPK 245 8**************************************.*************85 PP
2	WRKY	108.2	4.1e-34	363	421	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct++gCpv+k+ver+++dpk+v++tYeg+Hnhe AUR62040662-RA 363 LDDGYRWRKYGQKVVRGNPNPRSYYKCTHPGCPVRKHVERASHDPKAVITTYEGKHNHE 421 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 552 aa Download sequence
MSPAKLPISR SSCISVPPMF SPTSFLESPV FLSNLKGEPS PTTGSFFKPQ TSSGSTTYPS 60 VINSSNTFDG AQSSGFEFKP NTGSYSFGGF AFSGSLASSS DLNQQQAGQA NQVQPECPPQ 120 SSDPPVAVKS EPAPVNEQRP TMVLPSSGLP TEADSNEFNQ KSDSNNEGQT PPSEQKVLGS 180 QVSERTSDDG YNWRKYGQKL VKGSEFPRSY YKCTHPNCEV KKLFERSPDG TITEIIYKGQ 240 HDHPKPQPNR RLPAGSMLSA LEDKSDRVTP FNGQEGMPTN SYGQTANNNE PGGTPDQSPG 300 GANDNSGEIG ANQLNRITED AADDDPYAKR RRMEIGEMDI NSVVKPIREP RVVVQTVSEV 360 DILDDGYRWR KYGQKVVRGN PNPRSYYKCT HPGCPVRKHV ERASHDPKAV ITTYEGKHNH 420 EVPTARNSSH DTAAPPAQSM ASRMGSREGN DAVSLDLGVG IRSGSGFVPG HQQQQAMGGE 480 HLPGQPQFSS HNLLLLQQNP MSTFPGYVNG GMVLYGSREN HSQGHSIGNQ PVNHSSTNSY 540 QQNMGRILMG P*

Sequence ? help Back to Top

Protein Sequence Length: 552 aa Download sequence

MSPAKLPISR SSCISVPPMF SPTSFLESPV FLSNLKGEPS PTTGSFFKPQ TSSGSTTYPS  60
VINSSNTFDG AQSSGFEFKP NTGSYSFGGF AFSGSLASSS DLNQQQAGQA NQVQPECPPQ  120
SSDPPVAVKS EPAPVNEQRP TMVLPSSGLP TEADSNEFNQ KSDSNNEGQT PPSEQKVLGS  180
QVSERTSDDG YNWRKYGQKL VKGSEFPRSY YKCTHPNCEV KKLFERSPDG TITEIIYKGQ  240
HDHPKPQPNR RLPAGSMLSA LEDKSDRVTP FNGQEGMPTN SYGQTANNNE PGGTPDQSPG  300
GANDNSGEIG ANQLNRITED AADDDPYAKR RRMEIGEMDI NSVVKPIREP RVVVQTVSEV  360
DILDDGYRWR KYGQKVVRGN PNPRSYYKCT HPGCPVRKHV ERASHDPKAV ITTYEGKHNH  420
EVPTARNSSH DTAAPPAQSM ASRMGSREGN DAVSLDLGVG IRSGSGFVPG HQQQQAMGGE  480
HLPGQPQFSS HNLLLLQQNP MSTFPGYVNG GMVLYGSREN HSQGHSIGNQ PVNHSSTNSY  540
QQNMGRILMG P*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	1e-154	WRKY family protein