PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62040489-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 264aa    MW: 29202.2 Da    PI: 7.9662
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62040489-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.74.9e-12555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT+eE+  l+ +v+++G+g W tI r          R+  ++k++w++
   AUR62040489-RA  5 KQKWTAEEEAALKAGVRKHGSGKWQTILRDPEfsnvlCSRSNVDLKDKWRN 55
                     79**********************************999**********99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MGAPKQKWTA EEEAALKAGV RKHGSGKWQT ILRDPEFSNV LCSRSNVDLK DKWRNINVTL  60
SGLGSREKAR LALKRNPQIP KLDDKPSVVN HFRSDEDAVE DELVGTPSET VQVADSKKTY  120
TRLDNLILEA ITTLQEPKGC DRNAIAMYIE VKHRYRISES LPYSETRKDL LDSKYKDHAK  180
PESKELKIFT RSEVVAELGK MKSLSPHEAA SAAARAVAEA EVAIMEAEKA TREAEAAEAE  240
AEAAKVFAEA AIKVLKCQNL RAC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.11e-56MYB_related family protein