PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62040309-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C2H2
Protein Properties Length: 157aa    MW: 17887.8 Da    PI: 8.6761
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62040309-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.80.000175173123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C++C++ F ++  L  H++ H
  AUR62040309-RA 51 FSCTYCKRKFYSSQALGGHQNAH 73
                    89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MDFELKTSLH QNTSTSSSND LPHLINLNLV LDQSMSSSSS HSSPASEARV FSCTYCKRKF  60
YSSQALGGHQ NAHKLERTLA KKSKLLNSQL ANDHKPHNFD SSRMAMDSHQ LHAYANRQYR  120
EQGFEYNFRS DHMVEYGRRD INYGSTKEDL DLSLRL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57520.13e-24C2H2 family protein