PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62040034-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 266aa    MW: 30282.7 Da    PI: 5.03
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62040034-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR126.12.8e-081331904790
            FAR1  47 k..............tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     k              ++++ r+ + tr +Cka+++ k +k+g++ev   + +HnHel+
  AUR62040034-RA 133 KtklvemvdeedvnvKTRKPRQVSITRSNCKACIRAKVNKEGQFEVVAHVIQHNHELT 190
                     2445556666666556778888899*******************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MENSTFDKTN CSNLIHELLQ KQRQIETEFE IDLNRSIIEE EETNCFGDEF VPIFNNPDNA  60
DEAIDNADEA IENAEDAIHN AKNQVVHDKS IYSNSEQTAK SDATEDTNPI DAYGLDLRGS  120
FVGVGKRHSG QKKTKLVEMV DEEDVNVKTR KPRQVSITRS NCKACIRAKV NKEGQFEVVA  180
HVIQHNHELT KPQWHYLHRS ERKMTEEKVV TIKTMKSSSL TTMDTYNYMA TEAGGEQNIG  240
HSVVDHLNFC SRLRIEQIEL EMLKL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-11FAR1 family protein