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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | AUR62039781-RA | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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| Family | FAR1 | ||||||||
| Protein Properties | Length: 334aa MW: 36658.8 Da PI: 9.88 | ||||||||
| Description | FAR1 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | FAR1 | 24.8 | 7.3e-08 | 102 | 198 | 1 | 85 |
FAR1 1 kfYneYAkevGFsvrkskskks....krngeitkrtfvCskegkreeekkk.........tekerrtraetrtgCkaklkvkkekdgkwevtkle 82
+++++Y ++ GF v++++ ks krn + +r+f + kr++ + + +e+ +r++++++C l k +k+gkw++++ +
AUR62039781-RA 102 EYFRNYVQQQGFGVVRASGAKSgkgmKRNCR-WTREFFGKTVRKRKKPEPRlvsnaqiseDEDLCPKRKSKKCDCIVFLYAKVNKSGKWVIDQAH 195
589****************999555333333.33444444444444443337887766544444459***************************9 PP
FAR1 83 leH 85
l H
AUR62039781-RA 196 LTH 198
999 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 334 aa Download sequence |
MPMQELLLGA EWPEPREGTG TGCTWMMEYL EKTKDLEKYH GGEYRVSLDA KAVDGAVVID 60 EDVGDGGAAA LEALLNQVVV GEESFRTPKK GMVFGSMLEV DEYFRNYVQQ QGFGVVRASG 120 AKSGKGMKRN CRWTREFFGK TVRKRKKPEP RLVSNAQISE DEDLCPKRKS KKCDCIVFLY 180 AKVNKSGKWV IDQAHLTHVG HNPTPGKSKN ISRFRKKFLV DNPHLVRQLF IERKDGVPVA 240 NIYRRGIQMV DGDGSSGYFI GVSGGQIGAG NVGAAIPNSP PTPRSSTCSV AGGRPMFRTI 300 VPKPPTPTST QGCYQKAATQ LQFSQHGNQQ SQT* |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 128 | 148 | KRNCRWTREFFGKTVRKRKKP |
| 2 | 140 | 146 | KTVRKRK |
| 3 | 143 | 147 | RKRKK |
| 4 | 143 | 171 | RKRKKPEPRLVSNAQISEDEDLCPKRKSK |
| 5 | 144 | 172 | RKRKKPEPRLVSNAQISEDEDLCPKRKSK |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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