PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62039694-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 315aa    MW: 34290.7 Da    PI: 5.1978
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62039694-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.51.4e-1754104155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr +  +g+Wv+eIr+p++   + r++lg+f  +e+Aa+a++ a+++++g
  AUR62039694-RA  54 PVYRGVRMRT-WGKWVSEIREPRK---KSRIWLGTFPNPEMAARAHDVAALSIKG 104
                     68*****998.**********843...6**********************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MMEIQIPMSS NINNNNVTGI NRSGRDDTTT TTSIPNSDPA KTPKRARDSG GKHPVYRGVR  60
MRTWGKWVSE IREPRKKSRI WLGTFPNPEM AARAHDVAAL SIKGDSAILN FPELAGLLPR  120
PVSQNPRDVQ AAAAKAAAME NIDCITNNNN ISSSSSSSSL SLSPSLSPCS SLSSMVSAME  180
IGNSDELSEI VELPSLGPVG NSGDLMGSEL VYDFDNGDNN GWIYHNPPWM MQCMGDFAVV  240
PENVISTTFE DLSKVKSLVG INYKRWSQRM LIAFERVEVD YVLFNDAPKP IVQTNAMIEI  300
PSTPVARNKE SDPS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.12e-52ERF family protein