PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62039260-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 389aa MW: 42237.8 Da PI: 6.7441

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62039260-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	107.4	7e-34	190	248	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+s+fprsYYrCt+a C vkk+vers++dp+vv +tYeg+H+h+ AUR62039260-RA 190 LDDGYRWRKYGQKAVKNSPFPRSYYRCTTAACGVKKRVERSSDDPSVVMTTYEGQHTHP 248 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MMFGYNNNNS LFDVAAATPL DMLMMGSFDK GNNNNNNNYL GFMDMLGFQD YLGGGPTSLF 60 DLLPPTNIAT TLPSTATTTA QSSPQVIVQQ PQLAVKTTQV LDPCLSGCST VVVPGESSEA 120 ANTPATPNSL SISSSSSDAV NDDLPQHQSQ TADDAHDHHE EDKLKPKKKN QKRPKEPRFA 180 FMTKSEVDHL DDGYRWRKYG QKAVKNSPFP RSYYRCTTAA CGVKKRVERS SDDPSVVMTT 240 YEGQHTHPCP VMTRGGIGIG IGMGMFSMPN HLNQCSTAPT TPSAFGGSGA AASSTLLFPH 300 PQHYHQSNNL YSQHQQQQFP SFFHNQTPTS LSFSASGGGG QQHPNSIALQ RDMRPPCSSS 360 SNQVRDDGLL QDIVPSQMRN DQQPTKEE*

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MMFGYNNNNS LFDVAAATPL DMLMMGSFDK GNNNNNNNYL GFMDMLGFQD YLGGGPTSLF  60
DLLPPTNIAT TLPSTATTTA QSSPQVIVQQ PQLAVKTTQV LDPCLSGCST VVVPGESSEA  120
ANTPATPNSL SISSSSSDAV NDDLPQHQSQ TADDAHDHHE EDKLKPKKKN QKRPKEPRFA  180
FMTKSEVDHL DDGYRWRKYG QKAVKNSPFP RSYYRCTTAA CGVKKRVERS SDDPSVVMTT  240
YEGQHTHPCP VMTRGGIGIG IGMGMFSMPN HLNQCSTAPT TPSAFGGSGA AASSTLLFPH  300
PQHYHQSNNL YSQHQQQQFP SFFHNQTPTS LSFSASGGGG QQHPNSIALQ RDMRPPCSSS  360
SNQVRDDGLL QDIVPSQMRN DQQPTKEE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49520.1	9e-48	WRKY family protein