PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62039220-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 658aa MW: 75950.3 Da PI: 6.2577

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62039220-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	84.1	2.2e-26	28	114	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+eYAk++GF + k +s++s+ ++e+++++f C ++g++++++++ ++r++ ++gCka+l+vk+++dgkw+v+++++eHnHel p AUR62039220-RA 28 EFYKEYAKSLGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDA----INPRPSPKIGCKASLHVKRKQDGKWYVYNFVKEHNHELLP 114 6**************************************999877....9**********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 658 aa Download sequence
MESNTTMATS DLEPHEEMEF ESHEAAYEFY KEYAKSLGFG TAKLSSRRSR ASKEFIDAKF 60 SCIRYGNKQQ SDDAINPRPS PKIGCKASLH VKRKQDGKWY VYNFVKEHNH ELLPEQAHFF 120 RSHRDLDPLK NDVRLRRRKI LASVSKRFSA YQNVGCLDNL KRSQHAKGRS LSLEAGDSQM 180 LLDLFMQMQE EDPKFFYAVD LNEENRLRNV FWTWLMAVGG QPPLVLLSGE NNALQTAIAE 240 LLPDTRHYFS LSWTAEQFDK RWLELVEKFE LQDDEWLRSM YGNRIRWVPL FMRGVSFAGL 300 STRSRSECLN SFFDKYINAE SSLRDFLEQY KLLLCDRYEE EAKAEFDAWH EAPDLKSPSP 360 FEKQMSWVYT HEIFKRFQVE VLGAAACHLK KEKEDETGIT YTVKDFENNQ DFIVEWNESR 420 SEICCLCRMF EHHGYLCRHA IVVLQMSGVF SIPSKYVLQR WTSAALSRHS ISGKLDEVQA 480 KVRRYNDLCR RALILAEEGS LSIESYNVAV SSIRDGFQQC DHVNGSLEQD LRPNSCLDYS 540 TNCHEDDNRG IHSRLCDAEP DIRLIETTAV PEIGSGDVNV NNTRERGDSC IFHQDPLDQN 600 IAAVGPEHGF TQVETPNTRP AHLHNMFPVP FNNGMPNMYQ GAAPGQFHHG PWQEKHL*

Sequence ? help Back to Top

Protein Sequence Length: 658 aa Download sequence

MESNTTMATS DLEPHEEMEF ESHEAAYEFY KEYAKSLGFG TAKLSSRRSR ASKEFIDAKF  60
SCIRYGNKQQ SDDAINPRPS PKIGCKASLH VKRKQDGKWY VYNFVKEHNH ELLPEQAHFF  120
RSHRDLDPLK NDVRLRRRKI LASVSKRFSA YQNVGCLDNL KRSQHAKGRS LSLEAGDSQM  180
LLDLFMQMQE EDPKFFYAVD LNEENRLRNV FWTWLMAVGG QPPLVLLSGE NNALQTAIAE  240
LLPDTRHYFS LSWTAEQFDK RWLELVEKFE LQDDEWLRSM YGNRIRWVPL FMRGVSFAGL  300
STRSRSECLN SFFDKYINAE SSLRDFLEQY KLLLCDRYEE EAKAEFDAWH EAPDLKSPSP  360
FEKQMSWVYT HEIFKRFQVE VLGAAACHLK KEKEDETGIT YTVKDFENNQ DFIVEWNESR  420
SEICCLCRMF EHHGYLCRHA IVVLQMSGVF SIPSKYVLQR WTSAALSRHS ISGKLDEVQA  480
KVRRYNDLCR RALILAEEGS LSIESYNVAV SSIRDGFQQC DHVNGSLEQD LRPNSCLDYS  540
TNCHEDDNRG IHSRLCDAEP DIRLIETTAV PEIGSGDVNV NNTRERGDSC IFHQDPLDQN  600
IAAVGPEHGF TQVETPNTRP AHLHNMFPVP FNNGMPNMYQ GAAPGQFHHG PWQEKHL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.1	0.0	FAR1 family protein