PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62038382-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C2H2
Protein Properties Length: 175aa    MW: 19381.1 Da    PI: 9.7573
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62038382-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.30.000595117123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     +kC +Cg +F+    L  H+r+H
  AUR62038382-RA  95 HKCLICGVTFPLGQALGGHMRRH 117
                     79********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MVLKRSREER YNVESTIAMA NYLMMLSQGL KTATVTHSEG RVFECTTCNR KLPSFQALGG  60
HRASHKRPRA TSNYHNHDDN DHSMDHTTKG KPKMHKCLIC GVTFPLGQAL GGHMRRHRAA  120
LSVSLLPSHP LVSLSLSSSS PSYDCSIGIK RNGGSVLSLD LDLNLTSQEM DYWR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.14e-26C2H2 family protein