PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62038308-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 587aa MW: 68610.6 Da PI: 4.8242

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62038308-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.1	7.9e-20	164	266	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..............tekerrtraetrtgCkaklkvkkekdgkwevtkle 82 Y+ +A++vGFs+rk++ +++ +++ +t++ +vCs egkr++ kk ++++ r+ + trt+Cka+l+ k+++d+k++v + + AUR62038308-RA 164 LYSLHASTVGFSIRKHTIRYRLHTRIVTEKFYVCSAEGKRHTAAKKtnmvlmvdednkdlKQRKPRQVSITRTNCKASLRAKMNDDEKFKVVSHV 258 7999************************************99999*******98888999999********************** PP FAR1 83 leHnHela 90 l+HnHel+ AUR62038308-RA 259 LQHNHELT 266 ****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 587 aa Download sequence
MEERENSNFP DSKLLHQATM EEREIYNFRS TMPETSKSSN YENLMREFLQ LQRENQPPLT 60 QHPEKTWSFD LNQTFREGEA ENFIDDLNQF NDDNIQNSKV PEIQIQDIEN QGVSNTLEDE 120 DQVIPNTLDE EGQPVDEDED TTGLDMEGSL FRVERDTYQE IYDLYSLHAS TVGFSIRKHT 180 IRYRLHTRIV TEKFYVCSAE GKRHTAAKKT NMVLMVDEDN KDLKQRKPRQ VSITRTNCKA 240 SLRAKMNDDE KFKVVSHVLQ HNHELTRKQW HYLHRSEREV TIEKAEAIKT MKSAGLSTMD 300 TYNYMCTEAN GEENLGHSVV DHLNFYSRLR MEQIEAGDAQ TLVNILIEEQ KEDPNFYFRV 360 KFDKEGNEKT ESFVWFLETF KKSMEFQPPY SLTKTRLWLL QLSRVYNLKE KWCPALSKDF 420 FSAGILSSQR SESTNHAVGF RANKSTTLTE FYGIFVRTIK RWRSDEKYNE FIYSKSIAFT 480 SLPLSGMLKH VAQVYPLSLF RDFEEEFGYS MATIVQILGR TEENIILYEV SLEEKPWSSQ 540 QSQENEKARA FMEENFKSCM KMVEDLLADD AFTEEVAASD DNSNVA*

Sequence ? help Back to Top

Protein Sequence Length: 587 aa Download sequence

MEERENSNFP DSKLLHQATM EEREIYNFRS TMPETSKSSN YENLMREFLQ LQRENQPPLT  60
QHPEKTWSFD LNQTFREGEA ENFIDDLNQF NDDNIQNSKV PEIQIQDIEN QGVSNTLEDE  120
DQVIPNTLDE EGQPVDEDED TTGLDMEGSL FRVERDTYQE IYDLYSLHAS TVGFSIRKHT  180
IRYRLHTRIV TEKFYVCSAE GKRHTAAKKT NMVLMVDEDN KDLKQRKPRQ VSITRTNCKA  240
SLRAKMNDDE KFKVVSHVLQ HNHELTRKQW HYLHRSEREV TIEKAEAIKT MKSAGLSTMD  300
TYNYMCTEAN GEENLGHSVV DHLNFYSRLR MEQIEAGDAQ TLVNILIEEQ KEDPNFYFRV  360
KFDKEGNEKT ESFVWFLETF KKSMEFQPPY SLTKTRLWLL QLSRVYNLKE KWCPALSKDF  420
FSAGILSSQR SESTNHAVGF RANKSTTLTE FYGIFVRTIK RWRSDEKYNE FIYSKSIAFT  480
SLPLSGMLKH VAQVYPLSLF RDFEEEFGYS MATIVQILGR TEENIILYEV SLEEKPWSSQ  540
QSQENEKARA FMEENFKSCM KMVEDLLADD AFTEEVAASD DNSNVA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-20	FAR1 family protein