PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62038238-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family WRKY
Protein Properties Length: 339aa    MW: 37015.8 Da    PI: 9.9087
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62038238-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.51e-31267324359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D y+WrKYGqK++kgs++pr+YY+C++  gCp++k+ver+ +dp+++++tYegeHnh+
  AUR62038238-RA 267 DDYSWRKYGQKPIKGSPHPRGYYKCSTVrGCPARKHVERALDDPNMLVVTYEGEHNHS 324
                     99***********************9888****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MAVDLMLGSS SSNLSLSLSS SNHHQMEEAI AHETSAGLQS VHNFLHLLSP PNNNNSMEND  60
SNYQAVADDA VFRFKKVISL LGRARTGHAR FRRAPVAVDQ KPQHQTHQNG VVLCPKPLQQ  120
VPPPGMKMNG YDYATKVVAP TATINFSYSA GNSVKSTLTA DVDNKQDILM NNNNHHTINT  180
PPCAAAANST NTTTSFQMTN YSGMVSSVGR PPLSHTSSFK VRKCFSENGK CGGPSGRCHC  240
SKKRKMRQKR IVRVPAISAK MADIPPDDYS WRKYGQKPIK GSPHPRGYYK CSTVRGCPAR  300
KHVERALDDP NMLVVTYEGE HNHSLSVVET SSLILESS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.12e-75WRKY family protein