PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62037793-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 338aa    MW: 38071.9 Da    PI: 8.1439
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62037793-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR142.42.3e-1385184288
            FAR1   2 fYneYAkevGFsvrkskskks..krnge.itkrtfvCskegkreeekkk.........tekerrtraetrtgCkaklkvkkekdgkwevtklele 84 
                     +Yn+++k+ GF v+  +s ++  k+ ++     t++C + g+++++++          + +   t++++++gC+a +   ++++gkwe+ ++el+
  AUR62037793-RA  85 YYNAFGKQEGFGVVLGQSAYKtlKDGRKvKSAVTWKCECVGFPDTRRRVggkrlskelEGEPVATKKSKKCGCEAGMYACLRDHGKWEIVRVELK 179
                     8*************99987776744444045679***********9998999999888778888******************************* PP

            FAR1  85 Hn.He 88 
                     H  H+
  AUR62037793-RA 180 HKpHQ 184
                     *6466 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MLSSEVAEDV CVSLSHSDEG VAMDLINFEE GAGVDIVELC PYEDGVGMDS VGGDGGNMVN  60
LNIIKIDPPP EVGMIFDSWE KANMYYNAFG KQEGFGVVLG QSAYKTLKDG RKVKSAVTWK  120
CECVGFPDTR RRVGGKRLSK ELEGEPVATK KSKKCGCEAG MYACLRDHGK WEIVRVELKH  180
KPHQVSPSKS LLVTKYRLKE LEKMSYVRRK LHFRDDMVLP AATMHKWLAC ERNGVENMPF  240
TKKDVNNLMS RVKKLKLKDG DSNAMMNYFL MMQKNNKNFY RIHRLDANGV LQDVFWVDAR  300
SRAAYEDFGD VVCFDTTFLL NKYDLPFANI VGVIHHG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80010.15e-30FAR1 family protein