PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62037509-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ARF
Protein Properties Length: 813aa    MW: 90221.4 Da    PI: 6.3714
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62037509-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.62.3e-23128229199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d++  +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +++
  AUR62037509-RA 128 FCKTLTASDTSTHGGFSVPRRAAEKVfppldysQQPPA--QELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNE 218
                     99*****************************8544444..48************************************************..889 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     + +l+++++r+
  AUR62037509-RA 219 KNQLLLGIRRA 229
                     9999****997 PP
2Auxin_resp1187.8e-39254337183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+t+s F+v++nPras+seF+++++k++ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sdld+vrWpnS+Wrs+k
  AUR62037509-RA 254 AAHAANTNSCFTVFFNPRASPSEFIIPLSKYVKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVK 337
                     79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 813 aa     Download sequence    
MKLSTSGLGQ QGHEGGEKKC LNSELWHACA GPLVCLPTAG SRVVYFPQGH SEQVAATTNR  60
DIDGQIPNYP SLPAQLVCQL HNVTMHADVE TDEVYAQMTL QPLSPQEQKD IYLPADFGIP  120
SRQPTNYFCK TLTASDTSTH GGFSVPRRAA EKVFPPLDYS QQPPAQELIA RDLHDVEWKF  180
RHIFRGQPKR HLLTTGWSVF VSAKRLVAGD SVLFIWNEKN QLLLGIRRAT RPQTVMPSSV  240
LSSDSMHIGL LAAAAHAANT NSCFTVFFNP RASPSEFIIP LSKYVKAVYH TRVSVGMRFR  300
MLFETEESSV RRYMGTITGI SDLDSVRWPN SHWRSVKVGW DESTAGERQP RVSLWEIEPL  360
TTFPMYPSLF PLRLKRPWHA GTSSLSDNID DAANSLMWLR GQGGEQGLNS MNFQSLGMFP  420
WMQTRVDNML PLGNQNQQYQ ALLSSNFQNL RGGGDVLNPQ MMQFQQPMQY LPQSTSQLPM  480
LQQQQQMIHP SIAQQFMQGQ SQVSKDNLPQ RVLPQEYFKH NEGLANQQLC GPEAFSLSNN  540
GMQSRQQHTM SSSLGKADTS TANAELSTHT PVQNIMSSTC TEGISNLSDM SNVNHTMLNE  600
QTPQHPLVSL NSYTPANAFG DAVSLPPYPG KEASLETGNC SLDVQNHNVF GANLDSSGLV  660
LPMTMPTTYR TSSNDTDLCS IPSGASGFQL SMYGCNSNSP ELHSEGQGDL STPTRTFVKV  720
YKSGSVGRSL DISRFSSYHE LREELGQMFG IEGKLDDPLR SGWQLVFVDR ENDVLLLGDD  780
PWEAFVYNVS YIKILSPEDV QKLGKHGTET YS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37020.10.0ARF family protein