PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62037403-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 408aa    MW: 43817.3 Da    PI: 6.8021
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62037403-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.24e-10250298355
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      +h+ +Er RR++i +++  L+el+P +    +k   Ka +L + ++Y++sLq
  AUR62037403-RA 250 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 298
                     58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    
MGDDGSSNQM GFHGEIIPNS PSSGMISRST TLSSIYGSSW DQMVNLGNQS GNYGGASMVS  60
SGELTKSSSY PMLIESQGVS SSHLGNYPAD PNLAHQILPK LPMFGGRNFP EIVGPFGLHE  120
GSQSHFPPAY ASNRRGIDEK SSANVAQTER GCQVADGRAV GVSPNGKRKR DSESPSPTNE  180
TTDGDPQKDH SSDVSGQKGH DDQKKRNEPN AVANSSSAQA GKQVKDGSQS EEAPKQNYIH  240
VRARRGQATN SHSLAERVRR EKISERMRLL QELVPGCNKI TGKAVMLDEI INYVQSLQQQ  300
VEFLSMKLST VNPELNFDIE RLLTKDILHS RGNESSALGF NQGMGSAHPF TQGIHQSLTA  360
MPNSASQYHH MPQAVWDSDL QSLLHMGFDS NSAVGGLGPN GSSKTEL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.12e-80bHLH family protein