PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62037320-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 261aa    MW: 29051.6 Da    PI: 6.5166
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62037320-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.13.6e-09149196455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR+riN+++  L++l+P +     k +  a +L   ++Y++sLq
  AUR62037320-RA 149 SHSLAERVRRERINEKLKVLQDLVPGC----YKTMGMAVMLDVIINYVQSLQ 196
                     8*************************8....244777777777777777776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MAEFSSDIQK ILKPAAVFSQ LNSNIELLNS FSELNHSLSS NVLDYFSSNI NILNNANTAQ  60
PSYLNEQQPF HLPDSTVNQN RLFCATDQSP ATGSQSSTGI GSADGHNVRI TQNNSVAGKK  120
KKRKADDQEV EKPKEVIHVR AKRGQATDSH SLAERVRRER INEKLKVLQD LVPGCYKTMG  180
MAVMLDVIIN YVQSLQNQIE FLSMKLSAAS MFYDFNSPEA EAIETLQRAT TNPCDAQEME  240
RVAKEGYEGM LPRHQPAWPF *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1119124KKKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25330.15e-56bHLH family protein