PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62037106-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 366aa    MW: 40742.7 Da    PI: 9.6318
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62037106-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR131.36.6e-1068147271
            FAR1   2 fYneYAkevGFsvrkskskks......krngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkke 71 
                     fY +YA+e GF+vr s++k++      + +g +  + + Cskeg+ +++kk+    +    ++++ +r+gC ak+k +  
  AUR62037106-RA  68 FYYKYANERGFKVRSSTTKSQknkddpTGKGVTLIKYLLCSKEGYVTNNKKSgkqvEGACLKRKTMKRVGCPAKIKFSSL 147
                     9*************9988777444444445667788899********9999965444444569999*********98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    
MSESVEHCSS SVTTEDSNVR IFKTPTQPLL PKIYYNSRGD KEYMPCCSSE NKPFLGMIFD  60
SLQDGIAFYY KYANERGFKV RSSTTKSQKN KDDPTGKGVT LIKYLLCSKE GYVTNNKKSG  120
KQVEGACLKR KTMKRVGCPA KIKFSSLYGD GVKFSVIVDH EKRKNFVVNF DLATYESSCT  180
CRMFESQGVL CRHILFVMKG KCVREIPDAY ILNRWRKDAL KKASVIDVAL DDASKYDKKK  240
QLVSDVWSKI FSCVSLTDQS EDDLSELIKT LSSFEEQMIS KNNPENAPSS KEVKDADIQV  300
LVGSNKVDVN ALPQNQCLNK GSARSSKSLK SAKEIATKAK SKKGRTCIAC GKSGVSHDSR  360
NCPNK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.14e-12FAR1 family protein