PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62036843-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Nin-like

Protein Properties

Length: 920aa MW: 101442 Da PI: 6.7947

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62036843-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.8	5.3e-29	603	654	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+i+le+l+++F++++kdAAk++gvc+T+LKriCRq+GIkRWP+Rkik++ AUR62036843-RA 603 AEKTITLEVLRQHFAGSLKDAAKSIGVCPTTLKRICRQHGIKRWPSRKIKKV 654 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 920 aa Download sequence
MDDAVFHSSV AVGTPSSSAM ELDYMDELLL EGCWFEAFDG SNFFQQNAST SGAIFDSSYL 60 WPMLEVTDEK SSMNSSQKSG HQVRETSEMV DNSPLVDTQM GALVSMSNGQ GLVNIASDSN 120 QFDKFCDEGS ELNKLLWIKP GLNKAASSVM ERLFKALGYI KDSAKGKDLL VQIWVPVVRG 180 STRILTTVNQ PFSINSGSSQ LASYRNISTN YEFAAEEDSC VSVGLPGRVF LGKVPEWTPD 240 VRFFRVDEYP RVSYAQQCDV RGTLALPVFE QGSRNCLGVI EVVMTTQKVN YRPDLESVCR 300 ALEAVDLRSC SEIPGPQKSK EFCSSYQAAL PEILEVIKSA CSSHGLPLAQ TWVPCIQQGK 360 EGCRHSDENL SRCVSTVDSA CFVANPYMQD FHEACSEHHL FKGQGVAGKA FMTNQPCFSE 420 DITTYSKTEY PLSHHARMFG LCAAVAIRLR CIYTGNADFV VEFFLPTNCR DPEEQKKTLT 480 SLSIIIQRVC RSLRVVSDKE IEQETSMLND SFHRNKVLKL EDTVSASSQE ESCGTGLQER 540 ERTRSLSVPQ EDQQREVLAG KVLNQHPPQS YMKGSPGSLD NSAVGDGSFS TSGKPGDKKR 600 AKAEKTITLE VLRQHFAGSL KDAAKSIGVC PTTLKRICRQ HGIKRWPSRK IKKVGHSLQK 660 LQVVIDSVQG TSGALQIGSF YSNFPDLASP NFSNTSPFSN SKQTDPPQQT KELEGTATSK 720 SPTSSCSQSS SSSQCCSSGT QQQPSTGYKA SGKQDPQGGI TLREGALKRT RSEAEILHTP 780 SQNAANNISR SLSQKSLIEL RNNIDDRPPL PKCGVQMIQV DDSLRVKVTY GEEKIRFRML 840 RSWGFKYLVQ EVVKRFHIGD MSGYQLKYLD DDSDWVLLTC DADLEECADI SQSSQRQTIR 900 LTLQVSHSHS RSSVASNGH*

Sequence ? help Back to Top

Protein Sequence Length: 920 aa Download sequence

MDDAVFHSSV AVGTPSSSAM ELDYMDELLL EGCWFEAFDG SNFFQQNAST SGAIFDSSYL  60
WPMLEVTDEK SSMNSSQKSG HQVRETSEMV DNSPLVDTQM GALVSMSNGQ GLVNIASDSN  120
QFDKFCDEGS ELNKLLWIKP GLNKAASSVM ERLFKALGYI KDSAKGKDLL VQIWVPVVRG  180
STRILTTVNQ PFSINSGSSQ LASYRNISTN YEFAAEEDSC VSVGLPGRVF LGKVPEWTPD  240
VRFFRVDEYP RVSYAQQCDV RGTLALPVFE QGSRNCLGVI EVVMTTQKVN YRPDLESVCR  300
ALEAVDLRSC SEIPGPQKSK EFCSSYQAAL PEILEVIKSA CSSHGLPLAQ TWVPCIQQGK  360
EGCRHSDENL SRCVSTVDSA CFVANPYMQD FHEACSEHHL FKGQGVAGKA FMTNQPCFSE  420
DITTYSKTEY PLSHHARMFG LCAAVAIRLR CIYTGNADFV VEFFLPTNCR DPEEQKKTLT  480
SLSIIIQRVC RSLRVVSDKE IEQETSMLND SFHRNKVLKL EDTVSASSQE ESCGTGLQER  540
ERTRSLSVPQ EDQQREVLAG KVLNQHPPQS YMKGSPGSLD NSAVGDGSFS TSGKPGDKKR  600
AKAEKTITLE VLRQHFAGSL KDAAKSIGVC PTTLKRICRQ HGIKRWPSRK IKKVGHSLQK  660
LQVVIDSVQG TSGALQIGSF YSNFPDLASP NFSNTSPFSN SKQTDPPQQT KELEGTATSK  720
SPTSSCSQSS SSSQCCSSGT QQQPSTGYKA SGKQDPQGGI TLREGALKRT RSEAEILHTP  780
SQNAANNISR SLSQKSLIEL RNNIDDRPPL PKCGVQMIQV DDSLRVKVTY GEEKIRFRML  840
RSWGFKYLVQ EVVKRFHIGD MSGYQLKYLD DDSDWVLLTC DADLEECADI SQSSQRQTIR  900
LTLQVSHSHS RSSVASNGH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20640.2	0.0	Nin-like family protein