PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62036755-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 1024aa MW: 115653 Da PI: 6.6734

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62036755-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	39.7	1.6e-12	479	580	1	90
FAR1 1 kfYneYAkevGFsvr.....kskskkskrngeitkrtfvCskegkreeekkk.......tekerrtraetrtgCkaklkvkkekdgkwevtklel 83 k+Y+ Y+++ GF v+ k +s++ ++++ ++ ++C ++gk++ ++k +e+ ++++++++C ++ + +++g w v+k+++ AUR62036755-RA 479 KYYRGYGRQEGFGVVgigggKPSSNNAGKSTSYRTYVWKCECYGKTAYRRKVngkrvvvKEEPMVKKKTKKCDCPVMMYGQGNDEGGWLVKKVVN 573 69*********98433323334444566667777789****99998888888777777799************************ PP FAR1 84 eHnHela 90 eHnH ++ AUR62036755-RA 574 EHNHLVS 580 **765 PP

Sequence ? help Back to Top
Protein Sequence Length: 1024 aa Download sequence
MHLKPCIIVH HGGEWDQDEG QLIYNGGRVN TFDDIPEDVD SVYVKQVIDS LGYKDIVKVH 60 FLDPRKDFQC GIRFLGFENS SCDPCLSLLL EFRVIEVYTE NEHAHVPPHI GIGVGGHGSF 120 VELLNSGVLR STDPFIDYDT ERSDEDDAEI VNVRTRLNEE KQKEQSYEDE LVMLRKLAES 180 KGTDPSRYAC DSDGLSGTDS PYESSDEDDY GYLVQLVGNR KNTVKGGSEG SSSKFFVGQS 240 FDNSVTFKKV VTDYCIQTGR DIHFSRNDKN GVGGHCKSKD KGCPWRIWAS WEKGKRNFMV 300 KTHVGEHTCG REPTSKRVTA SWVARFFQRK FKVNPYMKVH DIIETVWLEK GLKVSRYLAF 360 RARKLGQKLI VVLVFSSLIA DLNLFPVLND CDSSDSSLDS SDCDEFPKSV ENDDGWEAFD 420 LNKEPPSEGV HYVIINRDFI NLNEDCNVGL ERELDSGTGS VLPQPEVGMV FGTWDEMNKY 480 YRGYGRQEGF GVVGIGGGKP SSNNAGKSTS YRTYVWKCEC YGKTAYRRKV NGKRVVVKEE 540 PMVKKKTKKC DCPVMMYGQG NDEGGWLVKK VVNEHNHLVS PELTKHIAMY RKENITKHLE 600 NRIENDHGSG APIGQIYNNM ASQRNGVRNM GFTKKDMHNL NVIYNSITLE EFVDSWWEVI 660 KKFKLEQYDC YERLEVPSMA LDGTIMAFDG TIMELDEKGG SNKQAKTGGG KKKRVMGKET 720 DVDNGTVHTL SLQSEVPFPP NMFGGQYFPH QVYHQQGQYT VASNGSGPSA FNGRMLVGGI 780 HMNEYADAVR YFTNNAYHGQ QHFPLHGHVL NSGFPTNMSM LLMCLLYPGD GGLYGSSIYI 840 QACPVFPAQR LHSLSVHLCP SQNIDENLLS LVHVKKIDNV DQIFLVLNQV ELMVINSHEG 900 CRNTKVVVLY SIAYLFRHEH DNTYYGFMER KRMLQAVARK IKEIASKYNL VFIVVNEAID 960 VFDNNGSREA LSTYSSGGEI KASLGSSWES LIRNKMFISH QYDINTKSWY RELTVLKSTN 1020 MSL*

Sequence ? help Back to Top

Protein Sequence Length: 1024 aa Download sequence

MHLKPCIIVH HGGEWDQDEG QLIYNGGRVN TFDDIPEDVD SVYVKQVIDS LGYKDIVKVH  60
FLDPRKDFQC GIRFLGFENS SCDPCLSLLL EFRVIEVYTE NEHAHVPPHI GIGVGGHGSF  120
VELLNSGVLR STDPFIDYDT ERSDEDDAEI VNVRTRLNEE KQKEQSYEDE LVMLRKLAES  180
KGTDPSRYAC DSDGLSGTDS PYESSDEDDY GYLVQLVGNR KNTVKGGSEG SSSKFFVGQS  240
FDNSVTFKKV VTDYCIQTGR DIHFSRNDKN GVGGHCKSKD KGCPWRIWAS WEKGKRNFMV  300
KTHVGEHTCG REPTSKRVTA SWVARFFQRK FKVNPYMKVH DIIETVWLEK GLKVSRYLAF  360
RARKLGQKLI VVLVFSSLIA DLNLFPVLND CDSSDSSLDS SDCDEFPKSV ENDDGWEAFD  420
LNKEPPSEGV HYVIINRDFI NLNEDCNVGL ERELDSGTGS VLPQPEVGMV FGTWDEMNKY  480
YRGYGRQEGF GVVGIGGGKP SSNNAGKSTS YRTYVWKCEC YGKTAYRRKV NGKRVVVKEE  540
PMVKKKTKKC DCPVMMYGQG NDEGGWLVKK VVNEHNHLVS PELTKHIAMY RKENITKHLE  600
NRIENDHGSG APIGQIYNNM ASQRNGVRNM GFTKKDMHNL NVIYNSITLE EFVDSWWEVI  660
KKFKLEQYDC YERLEVPSMA LDGTIMAFDG TIMELDEKGG SNKQAKTGGG KKKRVMGKET  720
DVDNGTVHTL SLQSEVPFPP NMFGGQYFPH QVYHQQGQYT VASNGSGPSA FNGRMLVGGI  780
HMNEYADAVR YFTNNAYHGQ QHFPLHGHVL NSGFPTNMSM LLMCLLYPGD GGLYGSSIYI  840
QACPVFPAQR LHSLSVHLCP SQNIDENLLS LVHVKKIDNV DQIFLVLNQV ELMVINSHEG  900
CRNTKVVVLY SIAYLFRHEH DNTYYGFMER KRMLQAVARK IKEIASKYNL VFIVVNEAID  960
VFDNNGSREA LSTYSSGGEI KASLGSSWES LIRNKMFISH QYDINTKSWY RELTVLKSTN  1020
MSL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	5e-06	FAR1 family protein