PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62036643-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 395aa MW: 45273.8 Da PI: 6.161

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62036643-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	33	1.9e-10	35	90	38	90
FAR1 38 egkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHn.Hela 90 eg+re+++ k +++r++r+ tr+gCka + k ++ d+ w+v++++ eHn H+l+ AUR62036643-RA 35 EGFRETKHFKrPDRKRKERSITRCGCKAFISFKWDHrDDSWYVKEFVAEHNgHDLV 90 67777766554688999***************999************88887 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MKNPEVIQDS DDGDEIDNVS DTDDDDILDS FADIEGFRET KHFKRPDRKR KERSITRCGC 60 KAFISFKWDH RDDSWYVKEF VAEHNGHDLV PMNQVYFERY TRDDYDGIEK MFWCDGICQA 120 DYKAFGSVIA FDTTYKVNAY NKPFVVIVGV NHHKKTVPLG VTLIANEKID TYIWVLRQLL 180 EAGGNVAPYT VVTDGDKSMA TAIEEVFPHA HHRLCLWHLM RNIKGHTNRR FCSGIMKCVD 240 GARTPSEFEQ AWEDLMKEYD EVRDKRQISK NDPGNREGEE NPKEKDIIRE QKKRKGRGKP 300 KQNVKTTVNV NVDTMVHDIG QSVHDITNQG THCQAGSQGA ALPVVKRGSF IDLLIKFMPR 360 TYNVGDAATA TDSYEVSKFE KVPTIFDWDP NTDY*

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MKNPEVIQDS DDGDEIDNVS DTDDDDILDS FADIEGFRET KHFKRPDRKR KERSITRCGC  60
KAFISFKWDH RDDSWYVKEF VAEHNGHDLV PMNQVYFERY TRDDYDGIEK MFWCDGICQA  120
DYKAFGSVIA FDTTYKVNAY NKPFVVIVGV NHHKKTVPLG VTLIANEKID TYIWVLRQLL  180
EAGGNVAPYT VVTDGDKSMA TAIEEVFPHA HHRLCLWHLM RNIKGHTNRR FCSGIMKCVD  240
GARTPSEFEQ AWEDLMKEYD EVRDKRQISK NDPGNREGEE NPKEKDIIRE QKKRKGRGKP  300
KQNVKTTVNV NVDTMVHDIG QSVHDITNQG THCQAGSQGA ALPVVKRGSF IDLLIKFMPR  360
TYNVGDAATA TDSYEVSKFE KVPTIFDWDP NTDY*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	44	51	KRPDRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80010.1	2e-31	FAR1 family protein