PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62035466-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family WOX
Protein Properties Length: 234aa    MW: 26650.9 Da    PI: 10.1383
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62035466-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox67.61.6e-2190149357
                     --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                     +R+++t+eq+ +Le l++   r+p+a+++e+++++l    +++ ++V++WFqN++a+e++
  AUR62035466-RA  90 TRWNPTQEQIGILEMLYRGgMRTPNAQQIEQITEQLskygKIEGKNVFYWFQNHKARERQ 149
                     7*****************99**************************************97 PP
2Wus_type_Homeobox119.12e-3890151465
  Wus_type_Homeobox   4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        tRW+Pt+eQi iLe+ly+ G+rtPn+++i++it++L++yGkie+kNVfyWFQN+kaRerqkq
     AUR62035466-RA  90 TRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITEQLSKYGKIEGKNVFYWFQNHKARERQKQ 151
                        8***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MGSSSMKVHP FARGIWDNHQ SHDSQAALSL GCKRFRPLAP KVATNNVVNN PSFDLKSFIK  60
PESGPRKVVS PSDHKKDSAT QQVESHPGGT RWNPTQEQIG ILEMLYRGGM RTPNAQQIEQ  120
ITEQLSKYGK IEGKNVFYWF QNHKARERQK QKRSNLGLSH NPRTPTASPT QIDTSVTLTL  180
DTRADIEEQQ ISPYKRKYRS WPTFQCSDTN PKKDHMNEED KTLELFPLHP ESR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46480.15e-73WOX family protein