PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62035439-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ARF
Protein Properties Length: 882aa    MW: 97360.6 Da    PI: 5.1436
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62035439-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.37.2e-24152253199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+lt sd++++g +++p++ ae+        ++++ + +l+++d++ ++W++++iyr++++r++lt+GW+ Fv +++L++gD v+F   ++++
  AUR62035439-RA 152 FCKTLTASDTSTHGGFSVPRRAAEKLfppldyTMQPPFQ-ELVVKDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVGSKRLRAGDAVLFI--RDEK 243
                     99*********************999****996666664.9************************************************..5699 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                     ++l+++v+r+
  AUR62035439-RA 244 GQLMIGVRRA 253
                     99******97 PP
2Auxin_resp113.32.3e-37278361183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+++++F+v+YnPra+++eFv++v k++ka++ ++vs+GmRf m+fete+s +rr++Gt+vgvsdldp+rWp+SkWr+L+
  AUR62035439-RA 278 AAHAAANRTPFTVFYNPRACPTEFVIPVGKYRKAIYgTQVSAGMRFGMMFETEESGKRRYMGTIVGVSDLDPLRWPGSKWRNLQ 361
                     79**********************************9*********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 882 aa     Download sequence    
MASTTVDDKV KTVGRGSCGP PFPSNLLEEM KLLKEMQDNS GARKPLHSEL WHACAGPLVS  60
LPQVGSLVYY FPQGHIEQVA ISTKRPATSQ IPNYPNLPSQ LMCQVHNVTL HSDKDTDEIF  120
AQMSLQPIKT EKDVFPIPDF GLKASKHPTE FFCKTLTASD TSTHGGFSVP RRAAEKLFPP  180
LDYTMQPPFQ ELVVKDLHDN TWTFRHIYRG QPKRHLLTTG WSVFVGSKRL RAGDAVLFIR  240
DEKGQLMIGV RRANRQTTTL PSSVLSADSM HIGVLAAAAH AAANRTPFTV FYNPRACPTE  300
FVIPVGKYRK AIYGTQVSAG MRFGMMFETE ESGKRRYMGT IVGVSDLDPL RWPGSKWRNL  360
QVEWDEPGCG DKQSRVSSWE IETPESLFLF PSLTSGFKRP FHPGFFGGEL EWGNSIKRPF  420
IHLPDMGAAN LSYASLPNVW SEQLVKALMR PENMGYPSML ASCPPPPILQ ETKANIEAAT  480
LHKPQIVSSQ NVSVQNYPSQ QLNQREVGNV SGVEQASKTN QPLMDGEKTK PEPLCEPSQL  540
SQLASAGHCN EERERSNLSN PPSQQSIDAK DNNQKLMQPP AMSSVFQSPL TDVPPSDLSS  600
LNGLFPYMDA SDWLPYSSST ISEVIDPSLP SIGQDIWEQS QNLRYPAQSD QFGSYSQLSD  660
ETNNQSGIYS CIDLDMGNGG NAIVDASIPN AVLNKMCPKE ASLQYSSDCL VGNFSSSQDL  720
QSQITSASLA DSQAFLQDFP DNNSGGTSSS NVDFDESSLL QNNSWQQVVP PMRTYTKVQK  780
AGSVGRSIDV TSYKDYEELR FAIERMFGLE CLLNDPRGSG WKLVYVDFES DVLLVGDDPW  840
EEFVSCVRCI RILSPAEVQQ MSEEGMQLLN NNAIPGISSA P*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19850.10.0ARF family protein