PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62035274-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family G2-like
Protein Properties Length: 339aa    MW: 37250 Da    PI: 6.8629
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62035274-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like1048.8e-33173228156
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                     k+r++W+peLH+rFv+a++qLGGs++AtPk+i++lmkv+gLt+++vkSHLQkYRl+
  AUR62035274-RA 173 KARRCWSPELHRRFVHALQQLGGSHVATPKQIRDLMKVDGLTNDEVKSHLQKYRLH 228
                     68****************************************************97 PP
2Myb_DNA-binding43.86.1e-14175226148
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W++e++ ++v+a +qlGg    t+k I   m   g+t  ++ks++qky+
   AUR62035274-RA 175 RRCWSPELHRRFVHALQQLGGShvaTPKQIRDLMKvDGLTNDEVKSHLQKYR 226
                      568*****************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MMDFRNNMQK CQEYIHALED EKKKIQVFQR ELPLCLELVT QAIEACKQQL CGNGTTTTTE  60
CLNGHSECSE QTTSDGPILE EFMPLKRSNS TDDEEDELES EKPQINNVNV NNNNKSNEKS  120
GKKSDWLRSV QLWNQTPDPP TTQEEAEMGP SSGGSGGSGG GSKKEKDAQS QRKARRCWSP  180
ELHRRFVHAL QQLGGSHVAT PKQIRDLMKV DGLTNDEVKS HLQKYRLHTR RPSSGVHNNA  240
NQQTPQFVVV GGIWVPPEYA ATTAGDTNTV TAPGSIYAPI ATVATPPHLR QTSPHMQHQK  300
QSSQSHCEER GSHSEGGVHS NSPATSSSTH TTTASHAH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25550.15e-89G2-like family protein