PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62035065-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 755aa MW: 85705.5 Da PI: 6.3959

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62035065-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.9	2.6e-21	59	152	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+++Ak++GFs+r+++++ + + +t+r+f+C + g+++ + +++ k +r+r+++r+gC+a +++ k++ +w+vt ++++HnHel AUR62035065-RA 59 EFYCSFAKQCGFSIRRHRTRGKdGVGRGVTRRDFTCHRGGHPQAKPSEEGKLQRNRKSSRCGCQAYMRIVKRSdldVPEWRVTGFSNNHNHELL 152 6*************9998874556679***************99**************99998676789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 755 aa Download sequence
MTVNGSQNME SSENETDLSQ DNIESAEGIS EDAILSRQTS VNLVPFIGQR FVSQDAAYEF 60 YCSFAKQCGF SIRRHRTRGK DGVGRGVTRR DFTCHRGGHP QAKPSEEGKL QRNRKSSRCG 120 CQAYMRIVKR SDLDVPEWRV TGFSNNHNHE LLKSVEAQIP PSHCTISADD KSRICMFAKA 180 GMSARQMLRL MELEKGVKLG CLPFTELHIR DLLQSFRHVD KDNDAIDLIS MCKRLKDENS 240 YFKYDFKLDG HNRLEHIAWS YPSSIQKYEA FGDAILLDTN HRLDAYDMLL GLLIGVDNHG 300 KACLYSCVLL RDENLESFTW ALKTFLCFMK GKAPQTILTD QNMWLKEAIT CEMPETKHAF 360 SIWHIIANLS DWFSLPLGSH YDGWKTEFYR LYSLEMVDEF EAEWKEMVDR YELQSNKHII 420 CLYALRDFWA LSFLRRYFFA GLMSRSVTDS INALIQRILS VQSTLDCFID KVADIAEYDD 480 HGGSKLKMQQ NEKVSLKTGS PMESHAATVF TPFAFSLLQE ELVSAPQYAS IMVGEGCFQI 540 RHHTEMDGGC KVMWDPSQEL IHCSCHQFEF LGILCRHILR VLSTNNCFRI PDPYLPLRWR 600 LVSNEHVEKE QTEKVKFLEA IASTIVSESV VTEERLTFAC EHMSMVLAHI KQLPKLNNHN 660 EANEMGINSS TGSLIIPGVE ASDSIAQSFA LGNPHESFLV KLKETNPNPG LDNNMSGKRR 720 RAIPCEQYAH AACDSAIIEG NSVHADGDAF CGFL*

Sequence ? help Back to Top

Protein Sequence Length: 755 aa Download sequence

MTVNGSQNME SSENETDLSQ DNIESAEGIS EDAILSRQTS VNLVPFIGQR FVSQDAAYEF  60
YCSFAKQCGF SIRRHRTRGK DGVGRGVTRR DFTCHRGGHP QAKPSEEGKL QRNRKSSRCG  120
CQAYMRIVKR SDLDVPEWRV TGFSNNHNHE LLKSVEAQIP PSHCTISADD KSRICMFAKA  180
GMSARQMLRL MELEKGVKLG CLPFTELHIR DLLQSFRHVD KDNDAIDLIS MCKRLKDENS  240
YFKYDFKLDG HNRLEHIAWS YPSSIQKYEA FGDAILLDTN HRLDAYDMLL GLLIGVDNHG  300
KACLYSCVLL RDENLESFTW ALKTFLCFMK GKAPQTILTD QNMWLKEAIT CEMPETKHAF  360
SIWHIIANLS DWFSLPLGSH YDGWKTEFYR LYSLEMVDEF EAEWKEMVDR YELQSNKHII  420
CLYALRDFWA LSFLRRYFFA GLMSRSVTDS INALIQRILS VQSTLDCFID KVADIAEYDD  480
HGGSKLKMQQ NEKVSLKTGS PMESHAATVF TPFAFSLLQE ELVSAPQYAS IMVGEGCFQI  540
RHHTEMDGGC KVMWDPSQEL IHCSCHQFEF LGILCRHILR VLSTNNCFRI PDPYLPLRWR  600
LVSNEHVEKE QTEKVKFLEA IASTIVSESV VTEERLTFAC EHMSMVLAHI KQLPKLNNHN  660
EANEMGINSS TGSLIIPGVE ASDSIAQSFA LGNPHESFLV KLKETNPNPG LDNNMSGKRR  720
RAIPCEQYAH AACDSAIIEG NSVHADGDAF CGFL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein