PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62034821-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 265aa    MW: 29806 Da    PI: 5.7811
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62034821-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR125.63.9e-08104208185
            FAR1   1 kfYneYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkk.................tekerrtraetrtgCkaklkvkkekdgk 75 
                     ++++eY+k+ GF v++++  k     + +   +  ++C + g +++++kk                 +e    +r +++++C  ++  + +++g+
  AUR62034821-RA 104 EYFREYGKKNGFGVVRTSACKVgkgPNAKMRRNCLWTCECFGLPDRKRKKvedslvtdaqvveevveDEAVGVKRRSKKVQCLVNVYANVNERGE 198
                     589***************9999532223333344579*******9999999********999987755555569********************* PP

            FAR1  76 wevtkleleH 85 
                     w v++ el+H
  AUR62034821-RA 199 WFVKRAELKH 208
                     ********** PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MDGVTHDEAV VSNTGDDDVL LFDLVNDGGG GVQVECWVEE VNDGAALREL LKGVVVDEES  60
YKTPKKGFSS VAISVEIEEF VEVDVGLPPP LVGMVFQSWE ELDEYFREYG KKNGFGVVRT  120
SACKVGKGPN AKMRRNCLWT CECFGLPDRK RKKVEDSLVT DAQVVEEVVE DEAVGVKRRS  180
KKVQCLVNVY ANVNERGEWF VKRAELKHCR HTPTPGKAKN ISRLRKKFLV ENPHVVRKLF  240
NERRCLEKRQ ISDTVIEHVL EDVV*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1149153RKRKK