PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62034763-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ARF
Protein Properties Length: 829aa    MW: 92222.5 Da    PI: 7.1014
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62034763-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.87.9e-13145230199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+k+lt sd++++g +++ +++a+e+  +      +++ +       + +  +++++r++l++GW+ Fv++++L +gD ++F   + +++el+v+
  AUR62034763-RA 145 FCKTLTASDTSTHGGFSVLRRHADECLPP-----LVSVDS----FVFFAM--DGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGENGELRVG 226
                     89*********************999433.....244333....455777..*******************************..449999**** PP

                     EE-S CS
              B3  96 vfrk 99 
                     v+r+
  AUR62034763-RA 227 VRRA 230
                     *996 PP
2Auxin_resp118.26.9e-39255337183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     a ha+s++++F+v+Y+Pr+s+++F+v++++++++lk+++s+GmRfkm+fe+e+s+e+r++Gt+vg++d++p rW++SkWr+Lk
  AUR62034763-RA 255 ALHAISSGTMFTVYYKPRTSPAQFIVPCDQYMESLKNQYSIGMRFKMRFEGEESPEQRFTGTIVGMEDANPHRWQDSKWRCLK 337
                     689******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 829 aa     Download sequence    
MSSSEVASMK ATKEATNKAG KHQQAHAGVG GGTGKVDPET ALYKELWHAC AGPLVTVPRP  60
NELVYYFPQG HIEQVEASTN QAADKQMPNY SLPWKILCRV IDVQLKAEPE TDEVYAQVML  120
LPVVKSVKEK GTSPDPQPHF HVHSFCKTLT ASDTSTHGGF SVLRRHADEC LPPLVSVDSF  180
VFFAMDGQPR RHLLQSGWSV FVSSKRLVAG DAFIFLRGEN GELRVGVRRA MRQQGVVPSS  240
VISSHSMHLG VLATALHAIS SGTMFTVYYK PRTSPAQFIV PCDQYMESLK NQYSIGMRFK  300
MRFEGEESPE QRFTGTIVGM EDANPHRWQD SKWRCLKVRW DETSTIPRPD RVSPWQTEPA  360
LTPPTINPLP VSRAKRPRVN VVTQSSESSV HTREGLSKVA ADTSPVGGYS RVLQGHEYPT  420
LRPNLVDSND SENAEKPNVW PNSIDDEKAD NVKASRKYAY ENWISSMRPE PAYADLLSTF  480
GVHNETASGF HSPYQTAATS PMKKTILDQD GRFSMLGNSW SMMPGSLSLN MSESNMKVHS  540
PSSNVSYQAQ GNVRYGGLSD MAMLRGHRID NHDGNWLMPP PGQSYFDNHA PTRETAMQPS  600
RNDHEPIKQK DGNYKLFGIP LISSSTTQDF SASSKRHLDE PSTPLTPTLH PLYNCESDRS  660
SEQSKGSKQM DNLPACSEQE KRMPSSQSLS RDAQVKGQGH SSRSCTKVQK QGIALGRSVD  720
LSKFNNYDQL VEELDCLFDF NRELKNPEKN WLIVYTDEEG DMMLVGDDPW QEFCGMVRKI  780
LIYTKEEVQK MTPRQNSKID ENMPAAGGSD LKEAKQSLPS SASNAESH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein