PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62034735-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NF-YB

Protein Properties

Length: 222aa MW: 24504.1 Da PI: 8.3069

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62034735-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	99.4	2.8e-31	20	114	2	96
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 req++++Pianv+r+m+++lP+ aki ++a et+q c+++fi + +ea+d c+ + rk i+ d l+ a+++lG+ ++vepl++++++y e+eg+ AUR62034735-RA 20 REQNHYIPIANVIRMMRQALPSTAKIFDEATETIQLCITKFIISILNEANDTCKVDYRKVITIDALIEAMSKLGLRHHVEPLSTFIHRYCEAEGK 114 89******************************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MRTNYALLHP PTPPKVANHR EQNHYIPIAN VIRMMRQALP STAKIFDEAT ETIQLCITKF 60 IISILNEAND TCKVDYRKVI TIDALIEAMS KLGLRHHVEP LSTFIHRYCE AEGKDNIRAQ 120 QMILYRPSPK GPTAVVSSLV VKSYNYYPHK GVRVVDDIGG GHGEYVNRGY GGIGDYVGHG 180 YGGAINDNTM MNYNGGSSSS SNNGVVNMLT TDMVVQLICF L*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21970.1	8e-32	NF-YB family protein