PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62034638-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

DBB

Protein Properties

Length: 365aa MW: 40455.7 Da PI: 5.6145

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62034638-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.6	9.4e-07	21	63	2	38
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 e+r C+ + e + ++C+ ++ lC +C e H+ Ht AUR62034638-RA 21 EKRLCDFCTESVALIYCRADSAKLCLSCDREVHSTnqlftkHT 63 6789****99*******************6677777777 PP
2	zf-B_box	29.2	1.9e-09	66	99	4	37
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkgH 37 + C+ +++ ++++fC++ ++ lC++C +e H++H AUR62034638-RA 66 QLCDACDSSPASIFCHTEHSVLCQNCDFERHSRH 99 68*****************************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MPNSPSNHHT NPENPQIPNT EKRLCDFCTE SVALIYCRAD SAKLCLSCDR EVHSTNQLFT 60 KHTRFQLCDA CDSSPASIFC HTEHSVLCQN CDFERHSRHG SSLDHDRRPL EGFSGCPCVS 120 ELSVAIGFEG FDSKSLILGG ESGVNKGFNG GLFDGLDEGN DGFSDLFVWD VPTMVSLDDL 180 IVSTNKSHSF QAMVVPPLPK DRNLSCGQHK HEILHQLRAL AKLEPGIKQD VNPLYMHQFA 240 ADEDEKDSMV QHKFQAHQRD EEHYTFHGNE ASPYNWCYDT GEDVNDIYFS SALSGSHNED 300 SVPNPDTPSG MCSSANLITN GCNSQNPIKN GSVGIPQNVS SREITSADRD TALSRYKEKK 360 RTRR*

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MPNSPSNHHT NPENPQIPNT EKRLCDFCTE SVALIYCRAD SAKLCLSCDR EVHSTNQLFT  60
KHTRFQLCDA CDSSPASIFC HTEHSVLCQN CDFERHSRHG SSLDHDRRPL EGFSGCPCVS  120
ELSVAIGFEG FDSKSLILGG ESGVNKGFNG GLFDGLDEGN DGFSDLFVWD VPTMVSLDDL  180
IVSTNKSHSF QAMVVPPLPK DRNLSCGQHK HEILHQLRAL AKLEPGIKQD VNPLYMHQFA  240
ADEDEKDSMV QHKFQAHQRD EEHYTFHGNE ASPYNWCYDT GEDVNDIYFS SALSGSHNED  300
SVPNPDTPSG MCSSANLITN GCNSQNPIKN GSVGIPQNVS SREITSADRD TALSRYKEKK  360
RTRR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47890.1	6e-70	CO-like family protein